The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Paelopatides sp. Yap | Echinodermata | Paelopatides sp. Yap | Deep sea | 6,633 | Yap Trench at 8°1′22"N; 137°50′41"E | - |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| - | 3.7Gb | Contig | 2020 | - | Fujian Agriculture and Forestry University | PRJCA003789 | 89.40% | 57,522 |
| Title | Journal | Pubmed ID |
|---|---|---|
| The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environments | iScience | 36444293 |
| Gene ID | Description |
|---|---|
| Paelopatides57478 | |
| Paelopatides57479 | |
| Paelopatides57480 | |
| Paelopatides57481 | PEPTIDYL-TRNA HYDROLASE 2 |
| Paelopatides57482 | CHONDROITIN SYNTHASE |
| Paelopatides57483 | |
| Paelopatides57484 | PROTEIN CBG26694 |
| Paelopatides57485 | PROTEIN CBG26694 |
| Paelopatides57486 | CHONDROITIN SYNTHASE |
| Paelopatides57487 | RNA POLYMERASE III DNA DIRECTED -RELATED |
| Paelopatides57488 | CELL DIVISION PROTEIN KINASE |
| Paelopatides57489 | INSULIN-LIKE GROWTH FACTOR BINDING PROTEIN-RELATED |
| Paelopatides57490 | PROTEIN CBG26694 |
| Paelopatides57491 | RETROVIRUS-RELATED POL POLYPROTEIN FROM TRANSPOSON 412-LIKE PROTEIN-RELATED |
| Paelopatides57492 | L1 TRANSPOSABLE ELEMENT-RELATED |
| Paelopatides57493 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
| Paelopatides57494 | |
| Paelopatides57495 | TYROSINE-PROTEIN KINASE |
| Paelopatides57496 | |
| Paelopatides57497 | |
| Paelopatides57498 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
| Paelopatides57499 | 2-HACID_DH_C DOMAIN-CONTAINING PROTEIN |
| Paelopatides57500 | PROTEIN CBG20215-RELATED |
| Paelopatides57501 | 2-HACID_DH_C DOMAIN-CONTAINING PROTEIN |
| Paelopatides57502 | SI:CH211-196P9.1-RELATED |
| Paelopatides57503 | MANNOSE, PHOSPHOLIPASE, LECTIN RECEPTOR RELATED |
| Paelopatides57504 | |
| Paelopatides57505 | |
| Paelopatides57506 | |
| Paelopatides57507 | |
| Paelopatides57508 | |
| Paelopatides57509 | ADAMTS A DISINTEGRIN AND METALLOPROTEASE WITH THROMBOSPONDIN MOTIFS PROTEASE |
| Paelopatides57510 | ADAMTS A DISINTEGRIN AND METALLOPROTEASE WITH THROMBOSPONDIN MOTIFS PROTEASE |
| Paelopatides57515 | ENDONUCLEASE |
| Paelopatides57516 | |
| Paelopatides57517 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides57518 | MITOCHONDRIAL GLYCINE TRANSPORTER |
| Paelopatides57519 | |
| Paelopatides57520 | |
| Paelopatides57521 | NETRIN RECEPTOR UNC5 |
| Paelopatides57522 | |
| Paelopatides57523 | PROTEIN CBG26694 |
| Paelopatides57524 | ENDONUCLEASE-RELATED |
| Paelopatides57525 | ATP SYNTHASE F CHAIN, MITOCHONDRIAL-RELATED |
| Paelopatides57526 | UNCHARACTERIZED |
| Paelopatides57527 | EPM2A-INTERACTING PROTEIN 1 |
| Paelopatides57528 | ZINC/IRON TRANSPORTER |
| Paelopatides57529 | |
| Paelopatides57530 | |
| Paelopatides57531 | GLYCYL-TRNA SYNTHETASE/DNA POLYMERASE SUBUNIT GAMMA-2 |
