The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Paelopatides sp. Yap | Echinodermata | Paelopatides sp. Yap | Deep sea | 6,633 | Yap Trench at 8°1′22"N; 137°50′41"E | - |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
- | 3.7Gb | Contig | 2020 | - | Fujian Agriculture and Forestry University | PRJCA003789 | 89.40% | 57,522 |
Title | Journal | Pubmed ID |
---|---|---|
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environments | iScience | 36444293 |
Gene ID | Description |
---|---|
Paelopatides57532 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
Paelopatides57533 | |
Paelopatides57534 | 30S RIBOSOMAL PROTEIN S14 |
Paelopatides57535 | VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN |
Paelopatides57536 | PHOSPHATIDYLINOSITOL KINASE |
Paelopatides57537 | INTEGRASE_SAM-LIKE_N DOMAIN-CONTAINING PROTEIN |
Paelopatides57539 | |
Paelopatides57540 | BETA-MANNOSIDASE |
Paelopatides57541 | |
Paelopatides57542 | ATP-DEPENDENT RNA HELICASE RHLE-RELATED |
Paelopatides57543 | RIM BINDING PROTEIN-RELATED |
Paelopatides57544 | |
Paelopatides57545 | RIM BINDING PROTEIN-RELATED |
Paelopatides57546 | RIM BINDING PROTEIN-RELATED |
Paelopatides57547 | |
Paelopatides57548 | TRANSIENT RECEPTOR POTENTIAL CATION CHANNEL PROTEIN PAINLESS |
Paelopatides57549 | |
Paelopatides57550 | DDE_TNP_IS1595 DOMAIN-CONTAINING PROTEIN |
Paelopatides57551 | PUTATIVE-RELATED |
Paelopatides57552 | |
Paelopatides57553 | BONUS, ISOFORM C-RELATED |
Paelopatides57554 | |
Paelopatides57555 | BONUS, ISOFORM C-RELATED |
Paelopatides57556 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Paelopatides57557 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Paelopatides57558 | BONUS, ISOFORM C-RELATED |
Paelopatides57559 | GTPASE, IMAP FAMILY MEMBER-RELATED |
Paelopatides57560 | GTPASE, IMAP FAMILY MEMBER-RELATED |
Paelopatides57561 | FIBRINOGEN/TENASCIN/ANGIOPOEITIN |
Paelopatides57562 | ZGC:195170 |
Paelopatides57563 | |
Paelopatides57564 | LARGE PROLINE-RICH PROTEIN BAG6 |
Paelopatides57565 | PROTEASE S28 PRO-X CARBOXYPEPTIDASE-RELATED |
Paelopatides57566 | |
Paelopatides57567 | PROTEASE S28 PRO-X CARBOXYPEPTIDASE-RELATED |
Paelopatides57568 | SIGNAL PEPTIDE, CUB AND EGF-LIKE DOMAIN-CONTAINING |
Paelopatides57570 | ENDOPLASMIC RETICULUM-GOLGI INTERMEDIATE COMPARTMENT PROTEIN |
Paelopatides57571 | SET DOMAIN-CONTAINING PROTEIN-RELATED |
Paelopatides57573 | AGAP008170-PA |
Paelopatides57574 | PARTNER OF BURSICON |
Paelopatides57575 | |
Paelopatides57576 | |
Paelopatides57577 | ULP_PROTEASE DOMAIN-CONTAINING PROTEIN |
Paelopatides57578 | ULP_PROTEASE DOMAIN-CONTAINING PROTEIN |
Paelopatides57579 | |
Paelopatides57580 | |
Paelopatides57581 | G PROTEIN-COUPLED RECEPTOR-RELATED |
Paelopatides57582 | |
Paelopatides57583 | SUSHI DOMAIN-CONTAINING PROTEIN 1 |
Paelopatides57584 | INACTIVE TYROSINE-PROTEIN KINASE 7 |