The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Paelopatides sp. Yap | Echinodermata | Paelopatides sp. Yap | Deep sea | 6,633 | Yap Trench at 8°1′22"N; 137°50′41"E | - |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| - | 3.7Gb | Contig | 2020 | - | Fujian Agriculture and Forestry University | PRJCA003789 | 89.40% | 57,522 |
| Title | Journal | Pubmed ID |
|---|---|---|
| The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environments | iScience | 36444293 |
| Gene ID | Description |
|---|---|
| Paelopatides57637 | |
| Paelopatides57638 | RAS-ASSOCIATING DOMAIN-CONTAINING PROTEIN |
| Paelopatides57639 | |
| Paelopatides57640 | |
| Paelopatides57641 | TRANSPOSABLE ELEMENT-RELATED |
| Paelopatides57642 | |
| Paelopatides57643 | |
| Paelopatides57644 | NACHT DOMAIN-CONTAINING PROTEIN |
| Paelopatides57645 | |
| Paelopatides57646 | |
| Paelopatides57647 | GUANIDINOACETATE N-METHYLTRANSFERASE |
| Paelopatides57648 | |
| Paelopatides57649 | |
| Paelopatides57650 | RETINOL DEHYDROGENASE |
| Paelopatides57651 | RETINOL DEHYDROGENASE |
| Paelopatides57652 | |
| Paelopatides57653 | |
| Paelopatides57654 | TRANSMEMBRANE PROTEIN |
| Paelopatides57655 | SYNAPTOTAGMIN |
| Paelopatides57656 | SNF2/RAD54 FAMILY MEMBER |
| Paelopatides57657 | DUF3504 DOMAIN-CONTAINING PROTEIN |
| Paelopatides57662 | |
| Paelopatides57663 | OVOCHYMASE-RELATED |
| Paelopatides57664 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides57665 | - |
| Paelopatides57666 | 52 KDA REPRESSOR OF THE INHIBITOR OF THE PROTEIN KINASE-LIKE PROTEIN-RELATED |
| Paelopatides57667 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides57668 | TRANSCRIPTASE, PUTATIVE-RELATED-RELATED |
| Paelopatides57669 | BUCENTAUR RELATED |
| Paelopatides57670 | NOTCH LIGAND FAMILY MEMBER |
| Paelopatides57671 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides57672 | BUCENTAUR RELATED |
| Paelopatides57673 | |
| Paelopatides57674 | 4-NITROPHENYLPHOSPHATASE-RELATED |
| Paelopatides57675 | 4-NITROPHENYLPHOSPHATASE-RELATED |
| Paelopatides57676 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides57677 | SET DOMAIN-CONTAINING PROTEIN-RELATED |
| Paelopatides57678 | |
| Paelopatides57679 | SENTRIN/SUMO-SPECIFIC PROTEASE |
| Paelopatides57680 | UBIQUITIN CARBOXYL-TERMINAL HYDROLASE |
| Paelopatides57681 | TYROSINE-PROTEIN KINASE RECEPTOR |
| Paelopatides57682 | |
| Paelopatides57683 | |
| Paelopatides57684 | |
| Paelopatides57685 | TAIL-ANCHORED PROTEIN INSERTION RECEPTOR WRB |
| Paelopatides57686 | RIBOSOMAL PROTEIN L19 |
| Paelopatides57687 | |
| Paelopatides57688 | UBIQUITIN CARBOXYL-TERMINAL HYDROLASE |
| Paelopatides57689 | |
| Paelopatides57690 |
