The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Paelopatides sp. Yap | Echinodermata | Paelopatides sp. Yap | Deep sea | 6,633 | Yap Trench at 8°1′22"N; 137°50′41"E | - |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| - | 3.7Gb | Contig | 2020 | - | Fujian Agriculture and Forestry University | PRJCA003789 | 89.40% | 57,522 |
| Title | Journal | Pubmed ID |
|---|---|---|
| The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environments | iScience | 36444293 |
| Gene ID | Description |
|---|---|
| Paelopatides57952 | SLIT RELATED LEUCINE-RICH REPEAT NEURONAL PROTEIN |
| Paelopatides57953 | G-PROTEIN COUPLED RECEPTOR 124-LIKE PROTEIN |
| Paelopatides57954 | SLIT RELATED LEUCINE-RICH REPEAT NEURONAL PROTEIN |
| Paelopatides57955 | |
| Paelopatides57956 | PROTEIN CBG26694 |
| Paelopatides57957 | PROTEIN CBG26694 |
| Paelopatides57958 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides57959 | |
| Paelopatides57960 | PROTEIN B, PUTATIVE-RELATED-RELATED |
| Paelopatides57961 | IG(IMMUNOGLOBULIN) AND LRR(LEUCINE RICH REPEAT) DOMAINS |
| Paelopatides57962 | PROTEIN CBG26694 |
| Paelopatides57963 | |
| Paelopatides57964 | |
| Paelopatides57965 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
| Paelopatides57966 | |
| Paelopatides57967 | |
| Paelopatides57968 | FI18240P1-RELATED |
| Paelopatides57969 | |
| Paelopatides57970 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
| Paelopatides57971 | |
| Paelopatides57972 | GLUTAMATE CYSTEINE LIGASE |
| Paelopatides57973 | GLUTAMATE CYSTEINE LIGASE |
| Paelopatides57974 | NACHT DOMAIN-CONTAINING PROTEIN |
| Paelopatides57975 | ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED |
| Paelopatides57976 | |
| Paelopatides57977 | TRANSPOSON TY3-I GAG-POL POLYPROTEIN |
| Paelopatides57978 | |
| Paelopatides57979 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides57980 | U5 SMALL NUCLEAR RIBONUCLEOPROTEIN 40 KDA PROTEIN |
| Paelopatides57982 | |
| Paelopatides57983 | REVERSE TRANSCRIPTASE |
| Paelopatides57984 | PROTEIN KINASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides57985 | MICRORNA PROCESSOR COMPLEX SUBUNIT DGCR8 |
| Paelopatides57986 | 5-HYDROXYTRYPTAMINE RECEPTOR |
| Paelopatides57987 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides57988 | |
| Paelopatides57995 | CAVEOLIN |
| Paelopatides57996 | PROTEIN CBG26694 |
| Paelopatides57997 | PROTEIN CBG26694 |
| Paelopatides57998 | THIOSULFATE SULFERTANSFERASE |
| Paelopatides57999 | WD-40 REPEAT PROTEIN |
| Paelopatides58001 | ETHANOLAMINEPHOSPHOTRANSFERASE |
| Paelopatides58002 | ETHANOLAMINEPHOSPHOTRANSFERASE |
| Paelopatides58003 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides58004 | |
| Paelopatides58005 | OXYSTEROL-BINDING PROTEIN-RELATED |
| Paelopatides58006 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides58007 | |
| Paelopatides58008 | GOLGI SNARE BET1-RELATED |
| Paelopatides58009 |
