About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40%57,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides58114ACYL-MALONYL CONDENSING ENZYME-RELATED
Paelopatides58115
Paelopatides58116
Paelopatides58117
Paelopatides58118
Paelopatides58119NETRIN/LAMININ-RELATED
Paelopatides58120
Paelopatides58121
Paelopatides58122NON-LTR RETROLELEMENT REVERSE TRANSCRIPTASE-LIKE PROTEIN-RELATED
Paelopatides58123
Paelopatides58124PROTEIN CBG26694
Paelopatides58125
Paelopatides58126
Paelopatides58127AMILORIDE-SENSITIVE SODIUM CHANNEL-RELATED
Paelopatides58128
Paelopatides58129
Paelopatides58130AMILORIDE-SENSITIVE SODIUM CHANNEL-RELATED
Paelopatides58131WAP FOUR-DISULFIDE CORE DOMAIN PROTEIN 1
Paelopatides58132CARBOHYDRATE SULFOTRANSFERASE
Paelopatides58133PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Paelopatides58134TRANSPOSON
Paelopatides58135TRANSPOSON
Paelopatides58136
Paelopatides58137
Paelopatides58138E3 UFM1-PROTEIN LIGASE 1
Paelopatides58139E3 UFM1-PROTEIN LIGASE 1
Paelopatides58140PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4
Paelopatides58141TRANSPORTIN 3 AND IMPORTIN 13
Paelopatides58142
Paelopatides58143
Paelopatides58145BONUS, ISOFORM C-RELATED
Paelopatides58146
Paelopatides58147
Paelopatides58148ZINC FINGER PROTEIN
Paelopatides58149
Paelopatides581505'-NUCLEOTIDASE-RELATED
Paelopatides581515'-NUCLEOTIDASE-RELATED
Paelopatides581525'-NUCLEOTIDASE-RELATED
Paelopatides581535'-NUCLEOTIDASE-RELATED
Paelopatides581545'-NUCLEOTIDASE-RELATED
Paelopatides58155REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides58156SUGAR KINASE
Paelopatides58157REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides58158
Paelopatides58159SI:CH211-196P9.1-RELATED
Paelopatides58160ENDONUCLEASE
Paelopatides58161
Paelopatides58162DEAD/H BOX POLYPEPTIDE 26/DICE1-RELATED
Paelopatides58163
Paelopatides58164
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