The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Paelopatides sp. Yap | Echinodermata | Paelopatides sp. Yap | Deep sea | 6,633 | Yap Trench at 8°1′22"N; 137°50′41"E | - |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| - | 3.7Gb | Contig | 2020 | - | Fujian Agriculture and Forestry University | PRJCA003789 | 89.40% | 57,522 |
| Title | Journal | Pubmed ID |
|---|---|---|
| The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environments | iScience | 36444293 |
| Gene ID | Description |
|---|---|
| Paelopatides58265 | NETRIN/LAMININ-RELATED |
| Paelopatides58266 | MANNOSE, PHOSPHOLIPASE, LECTIN RECEPTOR RELATED |
| Paelopatides58267 | REVERSE TRANSCRIPTASES |
| Paelopatides58268 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides58269 | FI04643P-RELATED |
| Paelopatides58270 | |
| Paelopatides58271 | B2 BRADYKININ RECEPTOR/ANGIOTENSIN II RECEPTOR |
| Paelopatides58272 | L1 TRANSPOSABLE ELEMENT-RELATED |
| Paelopatides58273 | |
| Paelopatides58274 | AGAP008221-PA |
| Paelopatides58275 | |
| Paelopatides58276 | |
| Paelopatides58277 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides58278 | |
| Paelopatides58279 | |
| Paelopatides58280 | XANTHINE DEHYDROGENASE |
| Paelopatides58281 | |
| Paelopatides58282 | ZINC FINGER PROTEIN |
| Paelopatides58283 | HEAT SHOCK PROTEIN 70KDA |
| Paelopatides58284 | FATTY ACID SYNTHASE |
| Paelopatides58285 | FATTY ACID SYNTHASE |
| Paelopatides58286 | INTEGRASE CATALYTIC DOMAIN-CONTAINING PROTEIN-RELATED |
| Paelopatides58287 | |
| Paelopatides58288 | |
| Paelopatides58289 | L-THREONINE ALDOLASE-RELATED |
| Paelopatides58290 | L-THREONINE ALDOLASE-RELATED |
| Paelopatides58291 | RIBOSOMAL PROTEIN L27 |
| Paelopatides58292 | SODIUM-COUPLED MONOCARBOXYLATE TRANSPORTER |
| Paelopatides58293 | PLEXIN |
| Paelopatides58294 | PLEXIN |
| Paelopatides58295 | BEN DOMAIN-CONTAINING PROTEIN 5 |
| Paelopatides58296 | N-HYDROXYARYLAMINE O-ACETYLTRANSFERASE |
| Paelopatides58297 | SET DOMAIN-CONTAINING PROTEIN-RELATED |
| Paelopatides58298 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
| Paelopatides58299 | UNCHARACTERIZED |
| Paelopatides58300 | UNCHARACTERIZED |
| Paelopatides58301 | TRANSPOSON |
| Paelopatides58302 | |
| Paelopatides58303 | NIPPED-B-LIKE PROTEIN DELANGIN SCC2-RELATED |
| Paelopatides58304 | NIPPED-B-LIKE PROTEIN DELANGIN SCC2-RELATED |
| Paelopatides58305 | NUCLEAR PORE COMPLEX PROTEIN SEC13 / SEH1 FAMILY MEMBER |
| Paelopatides58306 | NUCLEAR PORE COMPLEX PROTEIN SEC13 / SEH1 FAMILY MEMBER |
| Paelopatides58307 | |
| Paelopatides58308 | |
| Paelopatides58309 | CALBINDIN |
| Paelopatides58310 | |
| Paelopatides58311 | HOMEOBOX PROTEIN ARISTALESS |
| Paelopatides58312 | PHOSPHATIDYLINOSITOL 4-KINASE TYPE-II |
| Paelopatides58313 | |
| Paelopatides58314 | UV-STIMULATED SCAFFOLD PROTEIN A |
