The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Paelopatides sp. Yap | Echinodermata | Paelopatides sp. Yap | Deep sea | 6,633 | Yap Trench at 8°1′22"N; 137°50′41"E | - |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
- | 3.7Gb | Contig | 2020 | - | Fujian Agriculture and Forestry University | PRJCA003789 | 89.40% | 57,522 |
Title | Journal | Pubmed ID |
---|---|---|
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environments | iScience | 36444293 |
Gene ID | Description |
---|---|
Paelopatides58165 | |
Paelopatides58166 | PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4 |
Paelopatides58167 | E3 UBIQUITIN-PROTEIN LIGASE TRIP12 |
Paelopatides58168 | E3 UBIQUITIN-PROTEIN LIGASE TRIP12 |
Paelopatides58169 | |
Paelopatides58170 | |
Paelopatides58171 | |
Paelopatides58172 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Paelopatides58173 | |
Paelopatides58174 | PROTEIN CBR-CLEC-78 |
Paelopatides58175 | ACETYL-COA C-ACYLTRANSFERASE |
Paelopatides58176 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Paelopatides58177 | HEPARAN SULFATE SULFOTRANSFERASE |
Paelopatides58178 | ANK_REP_REGION DOMAIN-CONTAINING PROTEIN-RELATED |
Paelopatides58179 | IRON-SULFUR DOMAIN CONTAINING PROTEIN |
Paelopatides58180 | PROTEIN PHOSPHATASE 2C |
Paelopatides58181 | PROTEIN PHOSPHATASE 2C |
Paelopatides58182 | MITOCHONDRIA-EATING PROTEIN-RELATED |
Paelopatides58183 | SYNAPTOBREVIN HOMOLOG YKT6 |
Paelopatides58184 | SYNAPTOBREVIN HOMOLOG YKT6 |
Paelopatides58185 | ZINC FINGER CCHC DOMAIN-CONTAINING |
Paelopatides58186 | ZINC FINGER CCHC DOMAIN-CONTAINING |
Paelopatides58187 | ZINC FINGER CCHC DOMAIN-CONTAINING |
Paelopatides58188 | BUCENTAUR RELATED |
Paelopatides58189 | |
Paelopatides58190 | MYND-TYPE DOMAIN-CONTAINING PROTEIN |
Paelopatides58191 | PROTEIN CBG26694 |
Paelopatides58192 | |
Paelopatides58193 | OS05G0310600 PROTEIN |
Paelopatides58194 | EPM2A-INTERACTING PROTEIN 1 |
Paelopatides58195 | |
Paelopatides58196 | CTX-RELATED TYPE I TRANSMEMBRANE PROTEIN |
Paelopatides58197 | OVARIAN-SPECIFIC SERINE/THREONINE-PROTEIN KINASE LOK-RELATED |
Paelopatides58198 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Paelopatides58199 | |
Paelopatides58200 | MITOCHONDRIAL 39S RIBOSOMAL PROTEIN L42 |
Paelopatides58201 | XAP-5 PROTEIN-RELATED |
Paelopatides58202 | |
Paelopatides58203 | FACIOGENITAL DYSPLASIA PROTEIN |
Paelopatides58204 | FIBRINOGEN/TENASCIN/ANGIOPOEITIN |
Paelopatides58205 | FIBRINOGEN/TENASCIN/ANGIOPOEITIN |
Paelopatides58206 | FAS-ASSOCIATING DEATH DOMAIN-CONTAINING PROTEIN FADD |
Paelopatides58207 | |
Paelopatides58208 | ENZYMATIC POLYPROTEIN-RELATED |
Paelopatides58209 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Paelopatides58210 | ZGC:195170 |
Paelopatides58211 | SI:CH211-108C17.2-RELATED-RELATED |
Paelopatides58212 | CATION TRANSPORT PROTEIN CHAC-RELATED |
Paelopatides58213 | SERINE/THREONINE PROTEIN KINASE |
Paelopatides58214 |