The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Paelopatides sp. Yap | Echinodermata | Paelopatides sp. Yap | Deep sea | 6,633 | Yap Trench at 8°1′22"N; 137°50′41"E | - |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
- | 3.7Gb | Contig | 2020 | - | Fujian Agriculture and Forestry University | PRJCA003789 | 89.40% | 57,522 |
Title | Journal | Pubmed ID |
---|---|---|
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environments | iScience | 36444293 |
Gene ID | Description |
---|---|
Paelopatides58010 | TRANSLIN AND TRANSLIN ASSOCIATED PROTEIN X |
Paelopatides58011 | |
Paelopatides58012 | TRANSLIN AND TRANSLIN ASSOCIATED PROTEIN X |
Paelopatides58013 | |
Paelopatides58014 | FI04643P-RELATED |
Paelopatides58015 | |
Paelopatides58016 | L1 TRANSPOSABLE ELEMENT-RELATED |
Paelopatides58017 | |
Paelopatides58018 | CADHERIN DOMAIN-CONTAINING PROTEIN |
Paelopatides58019 | NON-LTR RETROLELEMENT REVERSE TRANSCRIPTASE-LIKE PROTEIN-RELATED |
Paelopatides58020 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Paelopatides58021 | NYD-SP28 PROTEIN |
Paelopatides58022 | METHYLMALONIC ACIDURIA AND HOMOCYSTINURIA TYPE C PROTEIN |
Paelopatides58023 | |
Paelopatides58024 | NADPH NITROREDUCTASE |
Paelopatides58025 | PPP4R2-RELATED PROTEIN |
Paelopatides58026 | ALPHA- 1,3 -FUCOSYLTRANSFERASE |
Paelopatides58027 | G PROTEIN-COUPLED RECEPTOR-RELATED |
Paelopatides58028 | DED DOMAIN-CONTAINING PROTEIN |
Paelopatides58029 | DED DOMAIN-CONTAINING PROTEIN |
Paelopatides58030 | FAS-ASSOCIATING DEATH DOMAIN-CONTAINING PROTEIN FADD |
Paelopatides58031 | DED DOMAIN-CONTAINING PROTEIN |
Paelopatides58032 | ENDONUCLEASE-RELATED |
Paelopatides58033 | ANK_REP_REGION DOMAIN-CONTAINING PROTEIN-RELATED |
Paelopatides58034 | PROTEIN CBG26694 |
Paelopatides58035 | |
Paelopatides58036 | RETROTRANSPOSON |
Paelopatides58037 | |
Paelopatides58038 | |
Paelopatides58039 | SI:CH211-196P9.1-RELATED |
Paelopatides58040 | |
Paelopatides58041 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Paelopatides58042 | |
Paelopatides58043 | |
Paelopatides58044 | BUCENTAUR RELATED |
Paelopatides58045 | B2 BRADYKININ RECEPTOR/ANGIOTENSIN II RECEPTOR |
Paelopatides58046 | |
Paelopatides58047 | |
Paelopatides58048 | HEXOKINASE |
Paelopatides58049 | ACYL-MALONYL CONDENSING ENZYME-RELATED |
Paelopatides58050 | DUAL SPECIFICITY PROTEIN KINASE |
Paelopatides58051 | BACTERICIDAL PERMEABILITY-INCREASING BPI PROTEIN-RELATED |
Paelopatides58052 | WSCD FAMILY MEMBER CG9164 |
Paelopatides58053 | NIPSNAP-RELATED |
Paelopatides58054 | ATP DEPENDENT LON PROTEASE FAMILY MEMBER |
Paelopatides58055 | ATP DEPENDENT LON PROTEASE FAMILY MEMBER |
Paelopatides58056 | AMINOMETHYLTRANSFERASE |
Paelopatides58057 | |
Paelopatides58058 | |
Paelopatides58059 |