The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Paelopatides sp. Yap | Echinodermata | Paelopatides sp. Yap | Deep sea | 6,633 | Yap Trench at 8°1′22"N; 137°50′41"E | - |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| - | 3.7Gb | Contig | 2020 | - | Fujian Agriculture and Forestry University | PRJCA003789 | 89.40% | 57,522 |
| Title | Journal | Pubmed ID |
|---|---|---|
| The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environments | iScience | 36444293 |
| Gene ID | Description |
|---|---|
| Paelopatides58629 | GTPASE, IMAP FAMILY MEMBER-RELATED |
| Paelopatides58630 | DUF3504 DOMAIN-CONTAINING PROTEIN |
| Paelopatides58631 | GTPASE, IMAP FAMILY MEMBER-RELATED |
| Paelopatides58632 | |
| Paelopatides58633 | |
| Paelopatides58634 | SRCR DOMAIN-CONTAINING PROTEIN |
| Paelopatides58635 | |
| Paelopatides58636 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides58637 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides58638 | RIBONUCLEASE H2 SUBUNIT B |
| Paelopatides58639 | CONSERVED OLIGOMERIC GOLGI COMPLEX COMPONENT 3 |
| Paelopatides58640 | N-ACETYLGALACTOSAMINYLTRANSFERASE |
| Paelopatides58641 | AGAP008170-PA |
| Paelopatides58642 | CYTOKINE RECEPTOR |
| Paelopatides58643 | INACTIVE TYROSINE-PROTEIN KINASE 7 |
| Paelopatides58644 | |
| Paelopatides58645 | NACHT DOMAIN-CONTAINING PROTEIN |
| Paelopatides58646 | |
| Paelopatides58647 | MYOTUBULARIN-RELATED |
| Paelopatides58648 | - |
| Paelopatides58649 | G PROTEIN-COUPLED RECEPTOR-RELATED |
| Paelopatides58650 | 52 KDA REPRESSOR OF THE INHIBITOR OF THE PROTEIN KINASE-LIKE PROTEIN-RELATED |
| Paelopatides58651 | - |
| Paelopatides58652 | |
| Paelopatides58653 | TYROSINE-PROTEIN KINASE |
| Paelopatides58654 | PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides58655 | PROTEIN CBG20422 |
| Paelopatides58656 | RETROTRANSPOSON |
| Paelopatides58657 | RAS-ASSOCIATING DOMAIN-CONTAINING PROTEIN |
| Paelopatides58658 | PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides58659 | |
| Paelopatides58660 | SI:CH211-196P9.1-RELATED |
| Paelopatides58661 | |
| Paelopatides58662 | |
| Paelopatides58663 | DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC5 FAMILY MEMBER |
| Paelopatides58664 | |
| Paelopatides58665 | - |
| Paelopatides58666 | SLIT RELATED LEUCINE-RICH REPEAT NEURONAL PROTEIN |
| Paelopatides58667 | |
| Paelopatides58668 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides58669 | ALPHA-2,8-SIALYLTRANSFERASE |
| Paelopatides58670 | TRANSPOSON |
| Paelopatides58671 | |
| Paelopatides58672 | |
| Paelopatides58673 | |
| Paelopatides58674 | THREONINE DEHYDRATASE, MITOCHONDRIAL-RELATED |
| Paelopatides58675 | |
| Paelopatides58676 | |
| Paelopatides58677 | REVERSE TRANSCRIPTASES |
| Paelopatides58678 | MYND-TYPE DOMAIN-CONTAINING PROTEIN |
