The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Paelopatides sp. Yap | Echinodermata | Paelopatides sp. Yap | Deep sea | 6,633 | Yap Trench at 8°1′22"N; 137°50′41"E | - |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| - | 3.7Gb | Contig | 2020 | - | Fujian Agriculture and Forestry University | PRJCA003789 | 89.40% | 57,522 |
| Title | Journal | Pubmed ID |
|---|---|---|
| The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environments | iScience | 36444293 |
| Gene ID | Description |
|---|---|
| Paelopatides58679 | SERINE/THREONINE-PROTEIN KINASE FRAY2 |
| Paelopatides58680 | |
| Paelopatides58682 | |
| Paelopatides58683 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides58684 | |
| Paelopatides58685 | RAB GDP-DISSOCIATION INHIBITOR |
| Paelopatides58686 | |
| Paelopatides58687 | KRAB AND ZINC FINGER DOMAIN-CONTAINING |
| Paelopatides58688 | ZINC FINGER AND SCAN DOMAIN-CONTAINING |
| Paelopatides58689 | |
| Paelopatides58690 | ATAXIN 7 RELATED |
| Paelopatides58691 | UNCHARACTERIZED |
| Paelopatides58692 | MITOGEN-ACTIVATED PROTEIN KINASE |
| Paelopatides58693 | |
| Paelopatides58694 | ADENOSYLHOMOCYSTEINASE |
| Paelopatides58695 | ADENOSYLHOMOCYSTEINASE |
| Paelopatides58696 | ADENOSYLHOMOCYSTEINASE |
| Paelopatides58697 | NUCLEAR RESPIRATORY FACTOR 1 |
| Paelopatides58698 | SMALL LYSINE-RICH PROTEIN 1 |
| Paelopatides58699 | PROTEIN REQUIRED FOR HYPHAL ANASTOMOSIS HAM-2 |
| Paelopatides58700 | CELL DIVISION PROTEIN KINASE |
| Paelopatides58701 | N-LYSINE METHYLTRANSFERASE KMT5A |
| Paelopatides58702 | MODULATOR OF FTSH PROTEASE HFLC |
| Paelopatides58703 | AAA-FAMILY ATPASE |
| Paelopatides58704 | |
| Paelopatides58705 | |
| Paelopatides58706 | |
| Paelopatides58707 | MODULATOR OF SMOOTHENED PROTEIN |
| Paelopatides58708 | ATP-DEPENDENT RNA HELICASE DBP3 |
| Paelopatides58709 | BONUS, ISOFORM C-RELATED |
| Paelopatides58710 | |
| Paelopatides58711 | SUZ DOMAIN-CONTAINING PROTEIN 1 |
| Paelopatides58712 | CDNA SEQUENCE BC021608 |
| Paelopatides58713 | |
| Paelopatides58714 | |
| Paelopatides58715 | PHOSPHOINOSITIDE-SPECIFIC PHOSPHOLIPASE C FAMILY PROTEIN |
| Paelopatides58716 | PARKIN COREGULATED GENE PROTEIN PARK2 COREGULATED |
| Paelopatides58717 | PROTEIN CBG26694 |
| Paelopatides58718 | PROTEIN CBG26694 |
| Paelopatides58719 | PROTEIN CBG26694 |
| Paelopatides58720 | CAMP-DEPENDENT PROTEIN KINASE REGULATORY CHAIN |
| Paelopatides58721 | ENDONUCLEASE-RELATED |
| Paelopatides58724 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides58725 | |
| Paelopatides58726 | PHD-TYPE DOMAIN-CONTAINING PROTEIN |
| Paelopatides58727 | PHD-TYPE DOMAIN-CONTAINING PROTEIN |
| Paelopatides58728 | |
| Paelopatides58729 | |
| Paelopatides58730 | PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE |
| Paelopatides58731 | PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE |
