About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40%57,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides58937SOLUTE CARRIER FAMILY 12, CATION COTRANSPORTERS
Paelopatides58938ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides58939CARBOXYLIC ESTER HYDROLASE
Paelopatides58940
Paelopatides58941
Paelopatides58942CTX-RELATED TYPE I TRANSMEMBRANE PROTEIN
Paelopatides58943
Paelopatides58944MITOCHONDRIAL GENOME MAINTENANCE EXONUCLEASE 1
Paelopatides58945
Paelopatides58946FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides58947
Paelopatides58948PROTEIN CBG26694
Paelopatides58949
Paelopatides58950
Paelopatides58951
Paelopatides58952
Paelopatides58953PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4
Paelopatides58954COMPLEMENT COMPONENT 1, S SUBCOMPONENT-RELATED
Paelopatides58955UNCHARACTERIZED
Paelopatides58956N-ACETYLGALACTOSAMINYLTRANSFERASE
Paelopatides58957N-ACETYLGALACTOSAMINYLTRANSFERASE
Paelopatides58958UBIQUITIN LIGASE E3 ALPHA-RELATED
Paelopatides58959UBIQUITIN LIGASE E3 ALPHA-RELATED
Paelopatides58960UBIQUITIN LIGASE E3 ALPHA-RELATED
Paelopatides58961DDE_TNP_IS1595 DOMAIN-CONTAINING PROTEIN
Paelopatides58962SI:CH211-196P9.1-RELATED
Paelopatides58963SI:CH211-196P9.1-RELATED
Paelopatides58964TRANSCRIPTASE, PUTATIVE-RELATED-RELATED
Paelopatides58965REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides58966MYND-TYPE DOMAIN-CONTAINING PROTEIN
Paelopatides58967MYND-TYPE DOMAIN-CONTAINING PROTEIN
Paelopatides58968RETICULOPHAGY REGULATOR 3
Paelopatides58969TRNA-DIHYDROURIDINE SYNTHASE
Paelopatides58970KINASE-RELATED
Paelopatides58971MUCIN-17
Paelopatides58972KINASE-RELATED
Paelopatides58973
Paelopatides58974
Paelopatides58975KINASE-RELATED
Paelopatides58976
Paelopatides58977CTX-RELATED TYPE I TRANSMEMBRANE PROTEIN
Paelopatides58978STRICTOSIDINE SYNTHASE-RELATED
Paelopatides58979SMALL NUCLEAR RIBONUCLEOPROTEIN-ASSOCIATED PROTEIN B AND N
Paelopatides58980PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Paelopatides58981DED DOMAIN-CONTAINING PROTEIN
Paelopatides58982REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides58983
Paelopatides58984ENDONUCLEASE-RELATED
Paelopatides58986PROTEIN TAG-278-RELATED
Paelopatides58987AGAP005574-PA
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