The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Paelopatides sp. Yap | Echinodermata | Paelopatides sp. Yap | Deep sea | 6,633 | Yap Trench at 8°1′22"N; 137°50′41"E | - |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
- | 3.7Gb | Contig | 2020 | - | Fujian Agriculture and Forestry University | PRJCA003789 | 89.40% | 57,522 |
Title | Journal | Pubmed ID |
---|---|---|
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environments | iScience | 36444293 |
Gene ID | Description |
---|---|
Paelopatides58937 | SOLUTE CARRIER FAMILY 12, CATION COTRANSPORTERS |
Paelopatides58938 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
Paelopatides58939 | CARBOXYLIC ESTER HYDROLASE |
Paelopatides58940 | |
Paelopatides58941 | |
Paelopatides58942 | CTX-RELATED TYPE I TRANSMEMBRANE PROTEIN |
Paelopatides58943 | |
Paelopatides58944 | MITOCHONDRIAL GENOME MAINTENANCE EXONUCLEASE 1 |
Paelopatides58945 | |
Paelopatides58946 | FIBRINOGEN/TENASCIN/ANGIOPOEITIN |
Paelopatides58947 | |
Paelopatides58948 | PROTEIN CBG26694 |
Paelopatides58949 | |
Paelopatides58950 | |
Paelopatides58951 | |
Paelopatides58952 | |
Paelopatides58953 | PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4 |
Paelopatides58954 | COMPLEMENT COMPONENT 1, S SUBCOMPONENT-RELATED |
Paelopatides58955 | UNCHARACTERIZED |
Paelopatides58956 | N-ACETYLGALACTOSAMINYLTRANSFERASE |
Paelopatides58957 | N-ACETYLGALACTOSAMINYLTRANSFERASE |
Paelopatides58958 | UBIQUITIN LIGASE E3 ALPHA-RELATED |
Paelopatides58959 | UBIQUITIN LIGASE E3 ALPHA-RELATED |
Paelopatides58960 | UBIQUITIN LIGASE E3 ALPHA-RELATED |
Paelopatides58961 | DDE_TNP_IS1595 DOMAIN-CONTAINING PROTEIN |
Paelopatides58962 | SI:CH211-196P9.1-RELATED |
Paelopatides58963 | SI:CH211-196P9.1-RELATED |
Paelopatides58964 | TRANSCRIPTASE, PUTATIVE-RELATED-RELATED |
Paelopatides58965 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Paelopatides58966 | MYND-TYPE DOMAIN-CONTAINING PROTEIN |
Paelopatides58967 | MYND-TYPE DOMAIN-CONTAINING PROTEIN |
Paelopatides58968 | RETICULOPHAGY REGULATOR 3 |
Paelopatides58969 | TRNA-DIHYDROURIDINE SYNTHASE |
Paelopatides58970 | KINASE-RELATED |
Paelopatides58971 | MUCIN-17 |
Paelopatides58972 | KINASE-RELATED |
Paelopatides58973 | |
Paelopatides58974 | |
Paelopatides58975 | KINASE-RELATED |
Paelopatides58976 | |
Paelopatides58977 | CTX-RELATED TYPE I TRANSMEMBRANE PROTEIN |
Paelopatides58978 | STRICTOSIDINE SYNTHASE-RELATED |
Paelopatides58979 | SMALL NUCLEAR RIBONUCLEOPROTEIN-ASSOCIATED PROTEIN B AND N |
Paelopatides58980 | PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN |
Paelopatides58981 | DED DOMAIN-CONTAINING PROTEIN |
Paelopatides58982 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Paelopatides58983 | |
Paelopatides58984 | ENDONUCLEASE-RELATED |
Paelopatides58986 | PROTEIN TAG-278-RELATED |
Paelopatides58987 | AGAP005574-PA |