The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Paelopatides sp. Yap | Echinodermata | Paelopatides sp. Yap | Deep sea | 6,633 | Yap Trench at 8°1′22"N; 137°50′41"E | - |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
- | 3.7Gb | Contig | 2020 | - | Fujian Agriculture and Forestry University | PRJCA003789 | 89.40% | 57,522 |
Title | Journal | Pubmed ID |
---|---|---|
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environments | iScience | 36444293 |
Gene ID | Description |
---|---|
Paelopatides59039 | |
Paelopatides59040 | ANK_REP_REGION DOMAIN-CONTAINING PROTEIN |
Paelopatides59041 | MOLTING PROTEIN MLT-4 |
Paelopatides59042 | |
Paelopatides59043 | POLY ADP-RIBOSE GLYCOHYDROLASE |
Paelopatides59044 | EPM2A-INTERACTING PROTEIN 1 |
Paelopatides59045 | |
Paelopatides59046 | DRONGO, ISOFORM F |
Paelopatides59047 | |
Paelopatides59048 | |
Paelopatides59049 | PROTEIN CBG26694 |
Paelopatides59050 | ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED |
Paelopatides59051 | ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED |
Paelopatides59052 | |
Paelopatides59053 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Paelopatides59054 | |
Paelopatides59056 | FIBRINOGEN/TENASCIN/ANGIOPOEITIN |
Paelopatides59057 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Paelopatides59058 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Paelopatides59059 | |
Paelopatides59060 | |
Paelopatides59061 | GTPASE, IMAP FAMILY MEMBER-RELATED |
Paelopatides59062 | HEDGEHOG |
Paelopatides59063 | |
Paelopatides59064 | |
Paelopatides59065 | PROTEIN C20ORF24 RAB5-INTERACTING PROTEIN |
Paelopatides59066 | |
Paelopatides59067 | PROTEIN CBG26694 |
Paelopatides59068 | DEHYDROGENASE/REDUCTASE (SDR FAMILY) MEMBER 4 |
Paelopatides59069 | PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4 |
Paelopatides59070 | |
Paelopatides59071 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Paelopatides59072 | |
Paelopatides59073 | |
Paelopatides59074 | |
Paelopatides59075 | PROTEIN CBG26694 |
Paelopatides59076 | PROTEIN CBG26694 |
Paelopatides59077 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Paelopatides59078 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Paelopatides59079 | |
Paelopatides59080 | |
Paelopatides59081 | MYOTUBULARIN-RELATED |
Paelopatides59082 | REVERSE TRANSCRIPTASE |
Paelopatides59083 | ALPHA/BETA HYDROLASE DOMAIN-CONTAINING PROTEIN |
Paelopatides59084 | |
Paelopatides59085 | ACTIVATOR OF BASAL TRANSCRIPTION 1 |
Paelopatides59086 | G PROTEIN-COUPLED RECEPTOR-RELATED |
Paelopatides59087 | |
Paelopatides59088 | REVERSE TRANSCRIPTASE |
Paelopatides59089 | CHARGED MULTIVESICULAR BODY PROTEIN |