The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Paelopatides sp. Yap | Echinodermata | Paelopatides sp. Yap | Deep sea | 6,633 | Yap Trench at 8°1′22"N; 137°50′41"E | - |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
- | 3.7Gb | Contig | 2020 | - | Fujian Agriculture and Forestry University | PRJCA003789 | 89.40% | 57,522 |
Title | Journal | Pubmed ID |
---|---|---|
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environments | iScience | 36444293 |
Gene ID | Description |
---|---|
Paelopatides59141 | POL PROTEIN |
Paelopatides59142 | POL PROTEIN |
Paelopatides59143 | POL PROTEIN |
Paelopatides59144 | POL PROTEIN |
Paelopatides59145 | POL PROTEIN |
Paelopatides59146 | POL PROTEIN |
Paelopatides59147 | ENZYMATIC POLYPROTEIN-RELATED |
Paelopatides59148 | ENDONUCLEASE-RELATED |
Paelopatides59149 | SRCR DOMAIN-CONTAINING PROTEIN |
Paelopatides59150 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Paelopatides59151 | G-PROTEIN COUPLED RECEPTOR |
Paelopatides59152 | |
Paelopatides59153 | |
Paelopatides59154 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Paelopatides59155 | |
Paelopatides59156 | HECT DOMAIN UBIQUITIN-PROTEIN LIGASE |
Paelopatides59157 | CENTROSOMAL PROTEIN 2 |
Paelopatides59158 | |
Paelopatides59160 | FIBRINOGEN/TENASCIN/ANGIOPOEITIN |
Paelopatides59161 | 52 KDA REPRESSOR OF THE INHIBITOR OF THE PROTEIN KINASE-LIKE PROTEIN-RELATED |
Paelopatides59162 | DDE_TNP_1_7 DOMAIN-CONTAINING PROTEIN |
Paelopatides59163 | NETRIN RECEPTOR UNC5 |
Paelopatides59164 | |
Paelopatides59165 | TAX1-BINDING PROTEIN 3-RELATED |
Paelopatides59166 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
Paelopatides59167 | |
Paelopatides59168 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Paelopatides59169 | INACTIVE TYROSINE-PROTEIN KINASE 7 |
Paelopatides59170 | MITOCHONDRIA-EATING PROTEIN-RELATED |
Paelopatides59171 | MITOCHONDRIA-EATING PROTEIN-RELATED |
Paelopatides59172 | SYNAPTOBREVIN HOMOLOG YKT6 |
Paelopatides59173 | ZINC FINGER CCHC DOMAIN-CONTAINING |
Paelopatides59174 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
Paelopatides59175 | ZINC FINGER CCHC DOMAIN-CONTAINING |
Paelopatides59176 | GLYCOLIPID TRANSFER PROTEIN-RELATED |
Paelopatides59177 | MANNOSE, PHOSPHOLIPASE, LECTIN RECEPTOR RELATED |
Paelopatides59178 | |
Paelopatides59179 | F5/8 TYPE C DOMAIN-CONTAINING PROTEIN-RELATED |
Paelopatides59180 | |
Paelopatides59181 | SI:CH211-196P9.1-RELATED |
Paelopatides59182 | PROTEIN CBG26694 |
Paelopatides59183 | LETHAL 2 GIANT LARVAE PROTEIN |
Paelopatides59184 | DUF3504 DOMAIN-CONTAINING PROTEIN |
Paelopatides59185 | |
Paelopatides59186 | SI:CH211-196P9.1-RELATED |
Paelopatides59187 | |
Paelopatides59188 | |
Paelopatides59189 | PROTEIN CBG26694 |
Paelopatides59190 | RAGULATOR COMPLEX PROTEIN LAMTOR5 |
Paelopatides59191 | NETRIN RECEPTOR UNC5 |