The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Paelopatides sp. Yap | Echinodermata | Paelopatides sp. Yap | Deep sea | 6,633 | Yap Trench at 8°1′22"N; 137°50′41"E | - |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| - | 3.7Gb | Contig | 2020 | - | Fujian Agriculture and Forestry University | PRJCA003789 | 89.40% | 57,522 |
| Title | Journal | Pubmed ID |
|---|---|---|
| The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environments | iScience | 36444293 |
| Gene ID | Description |
|---|---|
| Paelopatides59192 | NADH DEHYDROGENASE [UBIQUINONE] IRON-SULFUR PROTEIN 5 |
| Paelopatides59193 | ALPHA- 1,3 -FUCOSYLTRANSFERASE |
| Paelopatides59194 | SLIT RELATED LEUCINE-RICH REPEAT NEURONAL PROTEIN |
| Paelopatides59195 | IG(IMMUNOGLOBULIN) AND LRR(LEUCINE RICH REPEAT) DOMAINS |
| Paelopatides59196 | |
| Paelopatides59197 | |
| Paelopatides59198 | |
| Paelopatides59199 | |
| Paelopatides59200 | |
| Paelopatides59201 | |
| Paelopatides59202 | VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 37 |
| Paelopatides59203 | |
| Paelopatides59204 | VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 37 |
| Paelopatides59205 | DNAJ HOMOLOG SUBFAMILY C MEMBER 30, MITOCHONDRIAL |
| Paelopatides59206 | TRANSPOSASE, PUTATIVE-RELATED |
| Paelopatides59207 | |
| Paelopatides59208 | BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE |
| Paelopatides59209 | PROTEIN CBG26694 |
| Paelopatides59210 | |
| Paelopatides59211 | KICSTOR COMPLEX PROTEIN C12ORF66 |
| Paelopatides59212 | ENDONUCLEASE-RELATED |
| Paelopatides59213 | TRANSPOSON TY3-I GAG-POL POLYPROTEIN |
| Paelopatides59214 | MONOCARBOXYLATE TRANSPORTER |
| Paelopatides59215 | AD039 HT014 THIOREDOXIN FAMILY TRP26 |
| Paelopatides59216 | |
| Paelopatides59217 | TEKTIN |
| Paelopatides59218 | |
| Paelopatides59219 | |
| Paelopatides59220 | SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED |
| Paelopatides59221 | SUN-COR STEROID HORMONE RECEPTOR CO-REPRESSOR |
| Paelopatides59222 | |
| Paelopatides59223 | NEPHRIN |
| Paelopatides59224 | PROTEIN CBG26694 |
| Paelopatides59225 | |
| Paelopatides59226 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
| Paelopatides59227 | |
| Paelopatides59228 | |
| Paelopatides59229 | SET DOMAIN-CONTAINING PROTEIN-RELATED |
| Paelopatides59230 | SET DOMAIN-CONTAINING PROTEIN-RELATED |
| Paelopatides59231 | |
| Paelopatides59232 | |
| Paelopatides59233 | |
| Paelopatides59234 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides59235 | NACHT DOMAIN-CONTAINING PROTEIN |
| Paelopatides59236 | PROTEIN CBG26694 |
| Paelopatides59237 | NETRIN RECEPTOR UNC5 |
| Paelopatides59238 | FIBRINOGEN/TENASCIN/ANGIOPOEITIN |
| Paelopatides59239 | |
| Paelopatides59240 | FIBRINOGEN/TENASCIN/ANGIOPOEITIN |
| Paelopatides59241 |
