About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40%57,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides59242
Paelopatides59243(E3-INDEPENDENT) E2 UBIQUITIN-CONJUGATING ENZYME
Paelopatides59244
Paelopatides59245SI:CH211-108C17.2-RELATED-RELATED
Paelopatides59246
Paelopatides59247ENDONUCLEASE-RELATED
Paelopatides59248
Paelopatides59249
Paelopatides59250
Paelopatides59251
Paelopatides59252
Paelopatides59253
Paelopatides59254GEMININ
Paelopatides59255
Paelopatides59256PROTEIN CBG12054-RELATED
Paelopatides59257PROTEIN CBG12054-RELATED
Paelopatides59258
Paelopatides59259EPM2A-INTERACTING PROTEIN 1
Paelopatides59261INTEGRATOR COMPLEX SUBUNIT 3
Paelopatides59262EXS-RELATED PROTEIN
Paelopatides59263EXS-RELATED PROTEIN
Paelopatides59264
Paelopatides59265
Paelopatides59266
Paelopatides5926760S RIBOSOMAL PROTEIN L11-RELATED
Paelopatides59268
Paelopatides59269
Paelopatides59270HYPOXIA-INDUCIBLE FACTOR 1 ALPHA INHIBITOR-RELATED
Paelopatides59271
Paelopatides59272CYSTEINE PROTEASE FAMILY C1-RELATED
Paelopatides59273
Paelopatides59274NUCLEAR FACTOR ERYTHROID 2-RELATED FACTOR
Paelopatides59275NUCLEAR FACTOR ERYTHROID 2-RELATED FACTOR
Paelopatides59276INSULIN-LIKE GROWTH FACTOR BINDING PROTEIN-RELATED
Paelopatides59277ANILLIN/RHOTEKIN RTKN
Paelopatides59278EPIDIDYMAL MEMBRANE PROTEIN E9-RELATED
Paelopatides59279
Paelopatides59280-
Paelopatides5928152 KDA REPRESSOR OF THE INHIBITOR OF THE PROTEIN KINASE-LIKE PROTEIN-RELATED
Paelopatides59282
Paelopatides59283RETROTRANSPOSON
Paelopatides59284CATION TRANSPORT PROTEIN CHAC-RELATED
Paelopatides59285
Paelopatides59286
Paelopatides59287
Paelopatides59288
Paelopatides59289HELICASE SRCAP-RELATED
Paelopatides59290ULP_PROTEASE DOMAIN-CONTAINING PROTEIN
Paelopatides59291HELICASE SRCAP-RELATED
Paelopatides59292HELICASE SRCAP-RELATED
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