The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Paelopatides sp. Yap | Echinodermata | Paelopatides sp. Yap | Deep sea | 6,633 | Yap Trench at 8°1′22"N; 137°50′41"E | - |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| - | 3.7Gb | Contig | 2020 | - | Fujian Agriculture and Forestry University | PRJCA003789 | 89.40% | 57,522 |
| Title | Journal | Pubmed ID |
|---|---|---|
| The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environments | iScience | 36444293 |
| Gene ID | Description |
|---|---|
| Paelopatides59402 | |
| Paelopatides59403 | |
| Paelopatides59404 | |
| Paelopatides59405 | DISCS LARGE |
| Paelopatides59406 | DISCS LARGE |
| Paelopatides59407 | DISCS LARGE |
| Paelopatides59408 | INTERFERON-INDUCED PROTEIN WITH TETRATRICOPEPTIDE REPEATS |
| Paelopatides59409 | IP13529P |
| Paelopatides59410 | C-1-TETRAHYDROFOLATE SYNTHASE, CYTOPLASMIC-RELATED |
| Paelopatides59411 | |
| Paelopatides59412 | BARRIER TO AUTOINTEGRATION FACTOR 2 |
| Paelopatides59413 | POTASSIUM CHANNEL TETRAMERIZATION DOMAIN-CONTAINING |
| Paelopatides59414 | |
| Paelopatides59415 | TYROSINE-PROTEIN KINASE RECEPTOR |
| Paelopatides59418 | PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides59419 | OLIGORIBONUCLEASE, MITOCHONDRIAL |
| Paelopatides59420 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides59421 | |
| Paelopatides59422 | |
| Paelopatides59423 | |
| Paelopatides59424 | DNAJ-LIKE-2, ISOFORM A-RELATED |
| Paelopatides59425 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides59426 | AMP-ACTIVATED PROTEIN KINASE, GAMMA REGULATORY SUBUNIT |
| Paelopatides59427 | GDP-FUCOSE PROTEIN O-FUCOSYLTRANSFERASE 1 |
| Paelopatides59428 | |
| Paelopatides59429 | |
| Paelopatides59430 | |
| Paelopatides59431 | PARANEOPLASTIC ANTIGEN |
| Paelopatides59432 | PROTEIN CBG26694 |
| Paelopatides59433 | ENZYMATIC POLYPROTEIN-RELATED |
| Paelopatides59434 | ENDONUCLEASE-RELATED |
| Paelopatides59435 | DED DOMAIN-CONTAINING PROTEIN |
| Paelopatides59436 | BONUS, ISOFORM C-RELATED |
| Paelopatides59437 | CO-CHAPERONE PROTEIN DJLA |
| Paelopatides59438 | L1 TRANSPOSABLE ELEMENT-RELATED |
| Paelopatides59439 | |
| Paelopatides59440 | MITOCHONDRIAL IMPORT INNER MEMBRANE TRANSLOCASE SUBUNIT TIM22 |
| Paelopatides59441 | |
| Paelopatides59442 | ALPHA- 1,3 -FUCOSYLTRANSFERASE |
| Paelopatides59443 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides59444 | TUMOR ENDOTHELIAL MARKER 7 RELATED |
| Paelopatides59445 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides59446 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides59447 | - |
| Paelopatides59448 | REVERSE TRANSCRIPTASE |
| Paelopatides59449 | DEATH DOMAIN-CONTAINING PROTEIN CRADD |
| Paelopatides59450 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides59451 | SAM DOMAIN-CONTAINING PROTEIN-RELATED |
| Paelopatides59452 | |
| Paelopatides59453 | GAG-RELATED PROTEIN |
