The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Paelopatides sp. Yap | Echinodermata | Paelopatides sp. Yap | Deep sea | 6,633 | Yap Trench at 8°1′22"N; 137°50′41"E | - |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| - | 3.7Gb | Contig | 2020 | - | Fujian Agriculture and Forestry University | PRJCA003789 | 89.40% | 57,522 |
| Title | Journal | Pubmed ID |
|---|---|---|
| The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environments | iScience | 36444293 |
| Gene ID | Description |
|---|---|
| Paelopatides59558 | |
| Paelopatides59559 | |
| Paelopatides59560 | |
| Paelopatides59561 | SERINE/THREONINE-PROTEIN KINASE |
| Paelopatides59562 | DIPHTHAMIDE BIOSYNTHESIS PROTEIN |
| Paelopatides59563 | DIPHTHAMIDE BIOSYNTHESIS PROTEIN |
| Paelopatides59564 | STRUCTURAL MAINTENANCE OF CHROMOSOMES PROTEIN 3 |
| Paelopatides59565 | ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED |
| Paelopatides59566 | PROTEIN CBG26694 |
| Paelopatides59567 | |
| Paelopatides59568 | |
| Paelopatides59569 | FIBRINOGEN/TENASCIN/ANGIOPOEITIN |
| Paelopatides59570 | |
| Paelopatides59571 | HAT FAMILY DIMERISATION DOMAINCONTAINING PROTEIN-RELATED |
| Paelopatides59572 | |
| Paelopatides59573 | |
| Paelopatides59574 | |
| Paelopatides59575 | LYMPHOID-RESTRICTED MEMBRANE PROTEIN, JAW1 |
| Paelopatides59577 | |
| Paelopatides59578 | EF-HAND CALCIUM-BINDING DOMAIN-CONTAINING PROTEIN 5 |
| Paelopatides59579 | EF-HAND CALCIUM-BINDING DOMAIN-CONTAINING PROTEIN 5 |
| Paelopatides59580 | |
| Paelopatides59581 | |
| Paelopatides59582 | |
| Paelopatides59583 | |
| Paelopatides59584 | SIGNAL PEPTIDE PEPTIDASE |
| Paelopatides59585 | - |
| Paelopatides59586 | PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides59587 | |
| Paelopatides59588 | NUCLEAR RECEPTOR SUBFAMILY 0 GROUP B |
| Paelopatides59589 | GLYCOSYL HYDROLASE-RELATED |
| Paelopatides59590 | BIOGENESIS OF LYSOSOME-RELATED ORGANELLES COMPLEX 1 SUBUNIT 3 |
| Paelopatides59591 | NUCLEAR INHIBITOR OF PROTEIN PHOSPHATASE-1 |
| Paelopatides59592 | ENDONUCLEASE |
| Paelopatides59593 | |
| Paelopatides59594 | FIBRINOGEN/TENASCIN/ANGIOPOEITIN |
| Paelopatides59595 | APICAL ENDOSOMAL GLYCOPROTEIN PRECURSOR. |
| Paelopatides59596 | PROTEIN CBG26694 |
| Paelopatides59597 | PROTEIN CBG26694 |
| Paelopatides59598 | MATING RESPONSE PROTEIN POI2 |
| Paelopatides59599 | MEVALONATE KINASE/GALACTOKINASE |
| Paelopatides59600 | |
| Paelopatides59601 | 60S RIBOSOMAL PROTEIN L24 |
| Paelopatides59602 | NEUROTRANSMITTER GATED ION CHANNEL |
| Paelopatides59603 | |
| Paelopatides59604 | |
| Paelopatides59605 | MYOSIN LIGHT CHAIN 1, 3 |
| Paelopatides59606 | LEUCYL-TRNA SYNTHETASE |
| Paelopatides59607 | TRANSLATION INITIATION FACTOR IF-3 |
| Paelopatides59608 | TRANSCRIPTIONAL REGULATOR |
