The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Paelopatides sp. Yap | Echinodermata | Paelopatides sp. Yap | Deep sea | 6,633 | Yap Trench at 8°1′22"N; 137°50′41"E | - |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| - | 3.7Gb | Contig | 2020 | - | Fujian Agriculture and Forestry University | PRJCA003789 | 89.40% | 57,522 |
| Title | Journal | Pubmed ID |
|---|---|---|
| The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environments | iScience | 36444293 |
| Gene ID | Description |
|---|---|
| Paelopatides59660 | S-ANTIGEN PROTEIN |
| Paelopatides59661 | S-ANTIGEN PROTEIN |
| Paelopatides59662 | S-ANTIGEN PROTEIN |
| Paelopatides59663 | LEUCINE RICH REPEAT IN FLII INTERACTING PROTEIN |
| Paelopatides59664 | SULFOTRANSFERASE SULT |
| Paelopatides59665 | RUVB-RELATED REPTIN AND PONTIN |
| Paelopatides59666 | |
| Paelopatides59667 | CELL DIVISION CONTROL PROTEIN 6-RELATED |
| Paelopatides59668 | RETROTRANSPOSON |
| Paelopatides59669 | |
| Paelopatides59670 | PHD-TYPE DOMAIN-CONTAINING PROTEIN |
| Paelopatides59671 | PHD-TYPE DOMAIN-CONTAINING PROTEIN |
| Paelopatides59672 | CARBOHYDRATE SULFOTRANSFERASE |
| Paelopatides59673 | |
| Paelopatides59674 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides59675 | INSULIN-LIKE PEPTIDE 2-RELATED |
| Paelopatides59676 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides59677 | |
| Paelopatides59678 | |
| Paelopatides59679 | POL PROTEIN |
| Paelopatides59680 | PROTEIN CBG26694 |
| Paelopatides59681 | |
| Paelopatides59682 | SI:CH211-196P9.1-RELATED |
| Paelopatides59683 | ULP_PROTEASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides59684 | |
| Paelopatides59685 | |
| Paelopatides59686 | POLYCYSTIN FAMILY MEMBER |
| Paelopatides59687 | PDF RECEPTOR-LIKE PROTEIN-RELATED |
| Paelopatides59688 | |
| Paelopatides59689 | |
| Paelopatides59690 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides59691 | METHYLOSOME PROTEIN 50 |
| Paelopatides59692 | METHYLOSOME PROTEIN 50 |
| Paelopatides59693 | |
| Paelopatides59694 | ENDONUCLEASE-RELATED |
| Paelopatides59695 | |
| Paelopatides59696 | PEROXISOMAL MEMBRANE PROTEIN PEX13 |
| Paelopatides59697 | WW DOMAIN BINDING PROTEIN 2, ISOFORM E |
| Paelopatides59698 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
| Paelopatides59699 | FAS-ASSOCIATING DEATH DOMAIN-CONTAINING PROTEIN FADD |
| Paelopatides59700 | |
| Paelopatides59701 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides59702 | ACYLTRANSFERASE |
| Paelopatides59705 | CYTOKINE RECEPTOR |
| Paelopatides59706 | CYTOKINE RECEPTOR |
| Paelopatides59707 | |
| Paelopatides59708 | |
| Paelopatides59709 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
| Paelopatides59710 | TRANSPOSON |
| Paelopatides59711 |
