About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40%57,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides59762OLIGORIBONUCLEASE, MITOCHONDRIAL
Paelopatides59763
Paelopatides59764
Paelopatides59765
Paelopatides59766
Paelopatides597672-AMINOMUCONIC SEMIALDEHYDE DEHYDROGENASE
Paelopatides59768
Paelopatides59769-
Paelopatides59770EPM2A-INTERACTING PROTEIN 1
Paelopatides59771EPM2A-INTERACTING PROTEIN 1
Paelopatides59772PHD-TYPE DOMAIN-CONTAINING PROTEIN
Paelopatides59773PHD-TYPE DOMAIN-CONTAINING PROTEIN
Paelopatides59774RETROTRANSPOSON
Paelopatides59775PROTEIN CBG26694
Paelopatides59777ATP-DEPENDENT RNA HELICASE
Paelopatides59778GALACTOSE-1-PHOSPHATE URIDYLYLTRANSFERASE
Paelopatides59779POL PROTEIN
Paelopatides59780
Paelopatides59781REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides59782
Paelopatides59783UNCHARACTERIZED
Paelopatides59784UNCHARACTERIZED
Paelopatides59785PROTEIN CBG26694
Paelopatides59786OXIDASE/PEROXIDASE
Paelopatides59787OXIDASE/PEROXIDASE
Paelopatides59788
Paelopatides59789ENZYMATIC POLYPROTEIN-RELATED
Paelopatides59790OXIDASE/PEROXIDASE
Paelopatides59791
Paelopatides59792SOLUTE CARRIER FAMILY 17
Paelopatides59793LOW-TEMPERATURE VIABILITY PROTEIN LTV1-RELATED
Paelopatides59794FI20236P1
Paelopatides59795EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT I
Paelopatides59796EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT I
Paelopatides59797FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides59798
Paelopatides59799PROTEIN CBG26694
Paelopatides59800PHD-TYPE DOMAIN-CONTAINING PROTEIN
Paelopatides59801RETROTRANSPOSON
Paelopatides59802L1 TRANSPOSABLE ELEMENT-RELATED
Paelopatides59803TRANSPOSON
Paelopatides59804REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides59805FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides59806FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides59807SULFOTRANSFERASE SULT
Paelopatides59808VACUOLAR PROTEIN SORTING 28, ISOFORM 2 VPS28
Paelopatides59811ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides59812SLIT RELATED LEUCINE-RICH REPEAT NEURONAL PROTEIN
Paelopatides59813TRACE AMINE-ASSOCIATED RECEPTOR 19N-RELATED
Paelopatides59814NETRIN/LAMININ-RELATED
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