The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Paelopatides sp. Yap | Echinodermata | Paelopatides sp. Yap | Deep sea | 6,633 | Yap Trench at 8°1′22"N; 137°50′41"E | - |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
- | 3.7Gb | Contig | 2020 | - | Fujian Agriculture and Forestry University | PRJCA003789 | 89.40% | 57,522 |
Title | Journal | Pubmed ID |
---|---|---|
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environments | iScience | 36444293 |
Gene ID | Description |
---|---|
Paelopatides59762 | OLIGORIBONUCLEASE, MITOCHONDRIAL |
Paelopatides59763 | |
Paelopatides59764 | |
Paelopatides59765 | |
Paelopatides59766 | |
Paelopatides59767 | 2-AMINOMUCONIC SEMIALDEHYDE DEHYDROGENASE |
Paelopatides59768 | |
Paelopatides59769 | - |
Paelopatides59770 | EPM2A-INTERACTING PROTEIN 1 |
Paelopatides59771 | EPM2A-INTERACTING PROTEIN 1 |
Paelopatides59772 | PHD-TYPE DOMAIN-CONTAINING PROTEIN |
Paelopatides59773 | PHD-TYPE DOMAIN-CONTAINING PROTEIN |
Paelopatides59774 | RETROTRANSPOSON |
Paelopatides59775 | PROTEIN CBG26694 |
Paelopatides59777 | ATP-DEPENDENT RNA HELICASE |
Paelopatides59778 | GALACTOSE-1-PHOSPHATE URIDYLYLTRANSFERASE |
Paelopatides59779 | POL PROTEIN |
Paelopatides59780 | |
Paelopatides59781 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Paelopatides59782 | |
Paelopatides59783 | UNCHARACTERIZED |
Paelopatides59784 | UNCHARACTERIZED |
Paelopatides59785 | PROTEIN CBG26694 |
Paelopatides59786 | OXIDASE/PEROXIDASE |
Paelopatides59787 | OXIDASE/PEROXIDASE |
Paelopatides59788 | |
Paelopatides59789 | ENZYMATIC POLYPROTEIN-RELATED |
Paelopatides59790 | OXIDASE/PEROXIDASE |
Paelopatides59791 | |
Paelopatides59792 | SOLUTE CARRIER FAMILY 17 |
Paelopatides59793 | LOW-TEMPERATURE VIABILITY PROTEIN LTV1-RELATED |
Paelopatides59794 | FI20236P1 |
Paelopatides59795 | EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT I |
Paelopatides59796 | EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT I |
Paelopatides59797 | FIBRINOGEN/TENASCIN/ANGIOPOEITIN |
Paelopatides59798 | |
Paelopatides59799 | PROTEIN CBG26694 |
Paelopatides59800 | PHD-TYPE DOMAIN-CONTAINING PROTEIN |
Paelopatides59801 | RETROTRANSPOSON |
Paelopatides59802 | L1 TRANSPOSABLE ELEMENT-RELATED |
Paelopatides59803 | TRANSPOSON |
Paelopatides59804 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Paelopatides59805 | FIBRINOGEN/TENASCIN/ANGIOPOEITIN |
Paelopatides59806 | FIBRINOGEN/TENASCIN/ANGIOPOEITIN |
Paelopatides59807 | SULFOTRANSFERASE SULT |
Paelopatides59808 | VACUOLAR PROTEIN SORTING 28, ISOFORM 2 VPS28 |
Paelopatides59811 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
Paelopatides59812 | SLIT RELATED LEUCINE-RICH REPEAT NEURONAL PROTEIN |
Paelopatides59813 | TRACE AMINE-ASSOCIATED RECEPTOR 19N-RELATED |
Paelopatides59814 | NETRIN/LAMININ-RELATED |