About Trachythela sp. YZ-2020

Cold-water corals Trachythela sp. YZ-2020 are important habitats for creatures in the deep-sea environment, but they have been degraded by anthropogenic activity. They live in the cold, dark, and hypoxic deep-sea waters and are widespread around the world. Most of them must attach to hard-bottom substrates to grow, and only a few can live on soft sediments. Due to the lack of symbiotic zooxanthellae, they do not require sunlight as a source of energy, and their major source of nutrients is the microscopic zooplankton that comes from passing currents or descends from the surface of the ocean.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Trachythela sp. YZ-2020CnidariaTrachythela sp., Cold-water corals (CWCs)Cold seep/Hydrothermal vent～1068slope of the Xisha Trough (18°53′N, 112°66′E, July 2019) in the South China Sea (SCS)2770514

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
IDSSE_Tra_sp_1.0578.2MbContig2020JADLSH01Institute of Deep-Sea Science and Engineering,Chinese Academy of SciencesPRJNA66197590.70%35,305

References
TitleJournalPubmed ID
The First Draft Genome of a Cold-Water Coral Trachythela sp. (Alcyonacea: Stolonifera: Clavulariidae)Genome Biology and Evolution33331875

Gene Information

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Gene IDDescription
Clavulariidae_g14994
Clavulariidae_g14995ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Clavulariidae_g14996ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Clavulariidae_g14997
Clavulariidae_g14998STEROID 17-ALPHA-HYDROXYLASE/17,20 LYASE
Clavulariidae_g14999INNER MEMBRANE TRANSPORT PROTEIN YAJR
Clavulariidae_g15SYNAPTOTAGMIN
Clavulariidae_g150BTB/POZ DOMAIN-CONTAINING
Clavulariidae_g1500
Clavulariidae_g15000INNER MEMBRANE TRANSPORT PROTEIN YAJR
Clavulariidae_g15001INNER MEMBRANE TRANSPORT PROTEIN YAJR
Clavulariidae_g15002C2H2-TYPE DOMAIN-CONTAINING PROTEIN
Clavulariidae_g15003INNER MEMBRANE TRANSPORT PROTEIN YAJR
Clavulariidae_g15004REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Clavulariidae_g15005PHD-TYPE DOMAIN-CONTAINING PROTEIN
Clavulariidae_g15006EUKARYOTIC TRANSLATION INITIATION FACTOR 2C
Clavulariidae_g15007REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Clavulariidae_g15008ATP-DEPENDENT DNA HELICASE
Clavulariidae_g15009RGD1565685 PROTEIN
Clavulariidae_g1501
Clavulariidae_g15010
Clavulariidae_g15011
Clavulariidae_g15012ELECTRON TRANSFER FLAVOPROTEIN-UBIQUINONE OXIDOREDUCTASE
Clavulariidae_g15013CWF19, CELL CYCLE CONTROL PROTEIN
Clavulariidae_g15014KINESIN LIGHT CHAIN
Clavulariidae_g15015ENDONUCLEASE-RELATED
Clavulariidae_g15016INTRAFLAGELLAR TRANSPORT PROTEIN 43 HOMOLOG
Clavulariidae_g15017ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Clavulariidae_g15018
Clavulariidae_g15019
Clavulariidae_g1502
Clavulariidae_g15020
Clavulariidae_g15021SI:CH211-196P9.1-RELATED
Clavulariidae_g15022ENDONUCLEASE-RELATED
Clavulariidae_g15023ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Clavulariidae_g15024
Clavulariidae_g15025
Clavulariidae_g15026RING-TYPE DOMAIN-CONTAINING PROTEIN
Clavulariidae_g15027PHD-TYPE DOMAIN-CONTAINING PROTEIN
Clavulariidae_g15028ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Clavulariidae_g15029PROTEIN CBG26694
Clavulariidae_g1503HTH CENPB-TYPE DOMAIN-CONTAINING PROTEIN
Clavulariidae_g15030PROTECTION OF TELOMERES 1
Clavulariidae_g15031MITOCHONDRIAL RIBOSOMAL PROTEIN S31
Clavulariidae_g15032UNCHARACTERIZED
Clavulariidae_g15033L-ASPARAGINASE
Clavulariidae_g15034SLL0310 PROTEIN
Clavulariidae_g15035EGF-LIKE DOMAIN-CONTAINING PROTEIN
Clavulariidae_g15036TRANSPOSABLE ELEMENT TC3 TRANSPOSASE-LIKE PROTEIN
Clavulariidae_g15037GUANYLATE BINDING PROTEIN
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