Geodia barretti is a species of deep-sea sponge in the family Geodiidae, commonly found in cold-water ecosystems of the North Atlantic Ocean. This species thrives in nutrient-rich, cold-water environments and plays a crucial role in deep-sea ecosystems by filtering large volumes of water, contributing to nutrient cycling, and providing habitat for various marine organisms. Its unique adaptations to cold and high-pressure conditions make it an important subject for studying deep-sea biodiversity and ecological processes.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Geodia barretti | Porifera | deep-sea sponge | Deep sea | 30-2000 | Kosterfjord National Park, Sweden, West of Yttre Vattenholmen (58.876233, 11.101483) | 519541 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| Geodia_barretti_n_2022_12 | 144.8Mb | Scaffold | 2024 | CASHTH01 | pharmaceutical biosciences, uppsala university | PRJEB58046 | 71.50% | 31,884 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Whole genome sequence of the deep-sea sponge Geodia barretti (Metazoa, Porifera, Demospongiae) | G3 (Bethesda) | 37619978 |
| Gene ID | Description |
|---|---|
| CAI8047020.1 | GUANINE NUCLEOTIDE EXCHANGE FACTOR |
| CAI8047022.1 | GUANINE NUCLEOTIDE EXCHANGE FACTOR |
| CAI8047023.1 | GUANINE NUCLEOTIDE EXCHANGE FACTOR |
| CAI8047024.1 | BONUS, ISOFORM C-RELATED |
| CAI8047025.1 | 30S RIBOSOMAL PROTEIN S13/40S RIBOSOMAL PROTEIN S18 |
| CAI8047026.1 | |
| CAI8047027.1 | |
| CAI8047028.1 | |
| CAI8047029.1 | |
| CAI8047030.1 | |
| CAI8047031.1 | |
| CAI8047032.1 | DUAL SPECIFICITY PROTEIN KINASE |
| CAI8047033.1 | CYTOKINESIS PROTEIN 3 |
| CAI8047034.1 | |
| CAI8047036.1 | |
| CAI8047035.1 | |
| CAI8047037.1 | |
| CAI8047038.1 | |
| CAI8047039.1 | |
| CAI8047041.1 | ANKYRIN REPEAT FAMILY PROTEIN |
| CAI8047040.1 | ANKYRIN REPEAT FAMILY PROTEIN |
| CAI8047042.1 | SUA5 |
| CAI8047047.1 | SUA5 |
| CAI8047043.1 | SUA5 |
| CAI8047046.1 | SUA5 |
| CAI8047044.1 | SUA5 |
| CAI8047050.1 | SUA5 |
| CAI8047048.1 | SUA5 |
| CAI8047049.1 | SUA5 |
| CAI8047051.1 | SUA5 |
| CAI8047045.1 | SUA5 |
| CAI8047052.1 | |
| CAI8047053.1 | |
| CAI8047054.1 | CILIA- AND FLAGELLA-ASSOCIATED PROTEIN 47 |
| CAI8047056.1 | CILIA- AND FLAGELLA-ASSOCIATED PROTEIN 47 |
| CAI8047055.1 | CILIA- AND FLAGELLA-ASSOCIATED PROTEIN 47 |
| CAI8047058.1 | CILIA- AND FLAGELLA-ASSOCIATED PROTEIN 47 |
| CAI8047057.1 | CILIA- AND FLAGELLA-ASSOCIATED PROTEIN 47 |
| CAI8047059.1 | CILIA- AND FLAGELLA-ASSOCIATED PROTEIN 47 |
| CAI8047066.1 | |
| CAI8047064.1 | |
| CAI8047065.1 | |
| CAI8047063.1 | |
| CAI8047061.1 | |
| CAI8047060.1 | |
| CAI8047062.1 | |
| CAI8047067.1 | |
| CAI8047068.1 | |
| CAI8047070.1 | ANKYRIN REPEAT PROTEIN |
| CAI8047069.1 | ANKYRIN REPEAT FAMILY A |
