Geodia barretti is a species of deep-sea sponge in the family Geodiidae, commonly found in cold-water ecosystems of the North Atlantic Ocean. This species thrives in nutrient-rich, cold-water environments and plays a crucial role in deep-sea ecosystems by filtering large volumes of water, contributing to nutrient cycling, and providing habitat for various marine organisms. Its unique adaptations to cold and high-pressure conditions make it an important subject for studying deep-sea biodiversity and ecological processes.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Geodia barretti | Porifera | deep-sea sponge | Deep sea | 30-2000 | Kosterfjord National Park, Sweden, West of Yttre Vattenholmen (58.876233, 11.101483) | 519541 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| Geodia_barretti_n_2022_12 | 144.8Mb | Scaffold | 2024 | CASHTH01 | pharmaceutical biosciences, uppsala university | PRJEB58046 | 71.50% | 31,884 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Whole genome sequence of the deep-sea sponge Geodia barretti (Metazoa, Porifera, Demospongiae) | G3 (Bethesda) | 37619978 |
| Gene ID | Description |
|---|---|
| CAI8046871.1 | |
| CAI8046872.1 | SERINE/THREONINE PROTEIN KINASE |
| CAI8046874.1 | NADH DEHYDROGENASE SUBUNIT 1 |
| CAI8046877.1 | NADH DEHYDROGENASE SUBUNIT 1 |
| CAI8046876.1 | NADH DEHYDROGENASE SUBUNIT 1 |
| CAI8046875.1 | NADH DEHYDROGENASE SUBUNIT 1 |
| CAI8046873.1 | NADH DEHYDROGENASE SUBUNIT 1 |
| CAI8046880.1 | NADH DEHYDROGENASE SUBUNIT 1 |
| CAI8046881.1 | NADH DEHYDROGENASE SUBUNIT 1 |
| CAI8046878.1 | NADH DEHYDROGENASE SUBUNIT 1 |
| CAI8046879.1 | NADH DEHYDROGENASE SUBUNIT 1 |
| CAI8046882.1 | NADH DEHYDROGENASE SUBUNIT 1 |
| CAI8046883.1 | NADH DEHYDROGENASE SUBUNIT 1 |
| CAI8046884.1 | NADH DEHYDROGENASE SUBUNIT 1 |
| CAI8046886.1 | NADH DEHYDROGENASE SUBUNIT 1 |
| CAI8046885.1 | NADH DEHYDROGENASE SUBUNIT 1 |
| CAI8046887.1 | NADH DEHYDROGENASE UBIQUINONE IRON-SULFUR PROTEIN 8, MITOCHONDRIAL |
| CAI8046888.1 | NADH-UBIQUINONE OXIDOREDUCTASE CHAIN 6 |
| CAI8046889.1 | NADH-UBIQUINONE OXIDOREDUCTASE SUBUNIT ND4L |
| CAI8046890.1 | NADH-UBIQUINONE OXIDOREDUCTASE SUBUNIT ND4L |
| CAI8046891.1 | NADH-UBIQUINONE OXIDOREDUCTASE CHAIN 4 |
| CAI8046892.1 | NADH DEHYDROGENASE |
| CAI8046895.1 | PROTEASE HTPX |
| CAI8046893.1 | PROTEASE HTPX |
| CAI8046894.1 | PROTEASE HTPX |
| CAI8046897.1 | PROTEASE HTPX |
| CAI8046896.1 | PROTEASE HTPX |
| CAI8046898.1 | PROTEASE HTPX |
| CAI8046899.1 | |
| CAI8046901.1 | PROLYL-TRNA SYNTHETASE |
| CAI8046900.1 | PROLYL-TRNA SYNTHETASE |
| CAI8046902.1 | |
| CAI8046903.1 | SERINE PROTEASE INHIBITOR, SERPIN |
| CAI8046904.1 | PHOSPHOGLYCERATE KINASE |
| CAI8046906.1 | SUCCINYL-COA SYNTHETASE BETA CHAIN |
| CAI8046905.1 | SUCCINYL-COA SYNTHETASE BETA CHAIN |
| CAI8046907.1 | HYDROXYPYRUVATE ISOMERASE |
| CAI8046908.1 | ALDEHYDE DEHYDROGENASE |
| CAI8046910.1 | ACETYL-COENZYME A SYNTHETASE |
| CAI8046909.1 | ACETYL-COENZYME A SYNTHETASE |
| CAI8046911.1 | ACETYL-COENZYME A SYNTHETASE |
| CAI8046912.1 | |
| CAI8046913.1 | NITRILASE C965.09-RELATED |
| CAI8046916.1 | TRANSPORT ATP-BINDING PROTEIN |
| CAI8046914.1 | TRANSPORT ATP-BINDING PROTEIN |
| CAI8046915.1 | TRANSPORT ATP-BINDING PROTEIN |
| CAI8046917.1 | OLIGOPEPTIDE TRANSPORT ATP-BINDING PROTEIN APPD |
| CAI8046918.1 | OLIGOPEPTIDE TRANSPORT SYSTEM PERMEASE PROTEIN APPC |
| CAI8046920.1 | OLIGOPEPTIDE TRANSPORT SYSTEM PERMEASE PROTEIN APPC |
| CAI8046919.1 | OLIGOPEPTIDE TRANSPORT SYSTEM PERMEASE PROTEIN APPC |
