Geodia barretti is a species of deep-sea sponge in the family Geodiidae, commonly found in cold-water ecosystems of the North Atlantic Ocean. This species thrives in nutrient-rich, cold-water environments and plays a crucial role in deep-sea ecosystems by filtering large volumes of water, contributing to nutrient cycling, and providing habitat for various marine organisms. Its unique adaptations to cold and high-pressure conditions make it an important subject for studying deep-sea biodiversity and ecological processes.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Geodia barretti | Porifera | deep-sea sponge | Deep sea | 30-2000 | Kosterfjord National Park, Sweden, West of Yttre Vattenholmen (58.876233, 11.101483) | 519541 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| Geodia_barretti_n_2022_12 | 144.8Mb | Scaffold | 2024 | CASHTH01 | pharmaceutical biosciences, uppsala university | PRJEB58046 | 71.50% | 31,884 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Whole genome sequence of the deep-sea sponge Geodia barretti (Metazoa, Porifera, Demospongiae) | G3 (Bethesda) | 37619978 |
| Gene ID | Description |
|---|---|
| CAI8046621.1 | UNCHARACTERIZED |
| CAI8046625.1 | ATP7, ISOFORM B |
| CAI8046624.1 | ATP7, ISOFORM B |
| CAI8046622.1 | ATP7, ISOFORM B |
| CAI8046627.1 | ATP7, ISOFORM B |
| CAI8046623.1 | ATP7, ISOFORM B |
| CAI8046626.1 | ATP7, ISOFORM B |
| CAI8046628.1 | |
| CAI8046629.1 | MUCIN 4-RELATED |
| CAI8046630.1 | |
| CAI8046631.1 | |
| CAI8046632.1 | |
| CAI8046633.1 | |
| CAI8046634.1 | NUCLEOPORIN NUP35 |
| CAI8046637.1 | GLUCOSE-6-PHOSPHATE EXCHANGER SLC37A4 |
| CAI8046636.1 | GLUCOSE-6-PHOSPHATE EXCHANGER SLC37A4 |
| CAI8046635.1 | GLUCOSE-6-PHOSPHATE EXCHANGER SLC37A4 |
| CAI8046639.1 | GLUCOSE-6-PHOSPHATE EXCHANGER SLC37A4 |
| CAI8046638.1 | GLUCOSE-6-PHOSPHATE EXCHANGER SLC37A4 |
| CAI8046640.1 | GLUCOSE-6-PHOSPHATE EXCHANGER SLC37A4 |
| CAI8046641.1 | |
| CAI8046642.1 | UBIQUITIN |
| CAI8046643.1 | UBIQUITIN |
| CAI8046644.1 | |
| CAI8046648.1 | PDZ DOMAIN CONTAINING WHIRLIN AND HARMONIN-RELATED |
| CAI8046647.1 | PDZ DOMAIN CONTAINING WHIRLIN AND HARMONIN-RELATED |
| CAI8046646.1 | PDZ DOMAIN CONTAINING WHIRLIN AND HARMONIN-RELATED |
| CAI8046645.1 | PDZ DOMAIN CONTAINING WHIRLIN AND HARMONIN-RELATED |
| CAI8046649.1 | PDZ DOMAIN CONTAINING WHIRLIN AND HARMONIN-RELATED |
| CAI8046650.1 | |
| CAI8046651.1 | |
| CAI8046652.1 | INOSITOL POLYPHOSPHATE KINASE |
| CAI8046653.1 | INOSITOL POLYPHOSPHATE KINASE |
| CAI8046654.1 | GUANYL-NUCLEOTIDE EXCHANGE FACTOR |
| CAI8046655.1 | |
| CAI8046658.1 | DISKS LARGE HOMOLOG 5 |
| CAI8046661.1 | DISKS LARGE HOMOLOG 5 |
| CAI8046659.1 | DISKS LARGE HOMOLOG 5 |
| CAI8046662.1 | CENTROSOMAL PROTEIN 2 |
| CAI8046660.1 | DISKS LARGE HOMOLOG 5 |
| CAI8046657.1 | DISKS LARGE HOMOLOG 5 |
| CAI8046656.1 | DISKS LARGE HOMOLOG 5 |
| CAI8046663.1 | DISCS LARGE |
| CAI8046667.1 | |
| CAI8046666.1 | |
| CAI8046665.1 | |
| CAI8046664.1 | |
| CAI8046668.1 | |
| CAI8046669.1 | |
| CAI8046670.1 |
