About Geodia barretti

Geodia barretti is a species of deep-sea sponge in the family Geodiidae, commonly found in cold-water ecosystems of the North Atlantic Ocean. This species thrives in nutrient-rich, cold-water environments and plays a crucial role in deep-sea ecosystems by filtering large volumes of water, contributing to nutrient cycling, and providing habitat for various marine organisms. Its unique adaptations to cold and high-pressure conditions make it an important subject for studying deep-sea biodiversity and ecological processes.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Geodia barrettiPoriferadeep-sea spongeDeep sea30-2000Kosterfjord National Park, Sweden, West of Yttre Vattenholmen (58.876233, 11.101483)519541

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Geodia_barretti_n_2022_12144.8MbScaffold2024CASHTH01pharmaceutical biosciences, uppsala universityPRJEB5804671.50%31,884

References
TitleJournalPubmed ID
Whole genome sequence of the deep-sea sponge Geodia barretti (Metazoa, Porifera, Demospongiae)G3 (Bethesda)37619978

Gene Information

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Gene IDDescription
CAI8046471.1
CAI8046472.1
CAI8046473.1
CAI8046474.1
CAI8046475.1CBB3-TYPE CYTOCHROME C OXIDASE SUBUNIT FIXP
CAI8046476.1
CAI8046477.1CYTOCHROME C OXIDASE SUBUNIT 1
CAI8046478.1ASPARTATEAMMONIA/ARGININOSUCCINATE/ADENYLOSUCCINATE LYASE
CAI8046479.1
CAI8046480.1
CAI8046481.1ATP-BINDING CASSETTE SUB-FAMILY B
CAI8046483.1ATP-BINDING CASSETTE SUB-FAMILY B
CAI8046482.1ATP-BINDING CASSETTE SUB-FAMILY B
CAI8046484.1ATP-BINDING CASSETTE SUB-FAMILY B
CAI8046485.1ATP-BINDING CASSETTE SUB-FAMILY B
CAI8046486.1ATP-BINDING CASSETTE SUB-FAMILY B
CAI8046487.1PROTEIN SMF
CAI8046488.1
CAI8046489.1DNA HELICASE RECQ FAMILY MEMBER
CAI8046490.1UNCHARACTERIZED
CAI8046491.1MORN REPEAT-CONTAINING PROTEIN 4
CAI8046492.1GLUTAMATE-1-SEMIALDEHYDE 2,1-AMINOMUTASE
CAI8046493.1
CAI8046494.1OS01G0149700 PROTEIN
CAI8046495.1
CAI8046496.1
CAI8046497.1
CAI8046498.1
CAI8046505.1
CAI8046503.1
CAI8046504.1
CAI8046500.1
CAI8046501.1
CAI8046502.1
CAI8046499.1
CAI8046507.1
CAI8046506.1
CAI8046508.1
CAI8046509.1
CAI8046510.1
CAI8046511.1
CAI8046512.1
CAI8046513.1
CAI8046514.1
CAI8046515.1
CAI8046516.1
CAI8046517.1SI:CH211-266K2.1
CAI8046518.1SI:CH211-266K2.1
CAI8046519.1SI:CH211-266K2.1
CAI8046521.1PULMONARY SURFACTANT-ASSOCIATED PROTEIN A
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