About Geodia barretti

Geodia barretti is a species of deep-sea sponge in the family Geodiidae, commonly found in cold-water ecosystems of the North Atlantic Ocean. This species thrives in nutrient-rich, cold-water environments and plays a crucial role in deep-sea ecosystems by filtering large volumes of water, contributing to nutrient cycling, and providing habitat for various marine organisms. Its unique adaptations to cold and high-pressure conditions make it an important subject for studying deep-sea biodiversity and ecological processes.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Geodia barrettiPoriferadeep-sea spongeDeep sea30-2000Kosterfjord National Park, Sweden, West of Yttre Vattenholmen (58.876233, 11.101483)519541

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Geodia_barretti_n_2022_12144.8MbScaffold2024CASHTH01pharmaceutical biosciences, uppsala universityPRJEB5804671.50%31,884

References
TitleJournalPubmed ID
Whole genome sequence of the deep-sea sponge Geodia barretti (Metazoa, Porifera, Demospongiae)G3 (Bethesda)37619978

Gene Information

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Gene IDDescription
CAI8046171.1
CAI8046172.1
CAI8046173.1
CAI8046174.1
CAI8046175.1
CAI8046178.1
CAI8046179.1
CAI8046177.1
CAI8046176.1
CAI8046180.1
CAI8046181.1
CAI8046182.1
CAI8046183.1
CAI8046184.1
CAI8046185.1
CAI8046186.1
CAI8046188.1
CAI8046187.1
CAI8046189.1
CAI8046190.1
CAI8046191.1
CAI8046192.1OXA1
CAI8046193.1
CAI8046195.1MEMBRANE PROTEIN INSERTION EFFICIENCY FACTOR-RELATED
CAI8046194.1MEMBRANE PROTEIN INSERTION EFFICIENCY FACTOR-RELATED
CAI8046196.1RIBONUCLEASE P PROTEIN COMPONENT
CAI8046197.1
CAI8046198.1
CAI8046199.1BACTERIAL HEMOLYSIN-LIKE PROTEIN
CAI8046200.1DIHYDRONEOPTERIN ALDOLASE 1-RELATED
CAI8046201.1DIHYDRONEOPTERIN ALDOLASE 1-RELATED
CAI8046202.1
CAI8046203.130S RIBOSOMAL PROTEIN S1
CAI8046204.1
CAI8046205.1ATP-DEPENDENT CLP PROTEASE
CAI8046206.1COB--COM HETERODISULFIDE REDUCTASE SUBUNIT B 1
CAI8046207.1SUCCINATE DEHYDROGENASE 2 FLAVOPROTEIN SUBUNIT
CAI8046208.1NADH DEHYDROGENASE
CAI8046209.1NADH-UBIQUINONE OXIDOREDUCTASE CHAIN 4
CAI8046210.1
CAI8046214.1
CAI8046215.1
CAI8046211.1
CAI8046212.1
CAI8046213.1
CAI8046216.1
CAI8046217.1
CAI8046218.1
CAI8046219.1
CAI8046220.1
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