Geodia barretti is a species of deep-sea sponge in the family Geodiidae, commonly found in cold-water ecosystems of the North Atlantic Ocean. This species thrives in nutrient-rich, cold-water environments and plays a crucial role in deep-sea ecosystems by filtering large volumes of water, contributing to nutrient cycling, and providing habitat for various marine organisms. Its unique adaptations to cold and high-pressure conditions make it an important subject for studying deep-sea biodiversity and ecological processes.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Geodia barretti | Porifera | deep-sea sponge | Deep sea | 30-2000 | Kosterfjord National Park, Sweden, West of Yttre Vattenholmen (58.876233, 11.101483) | 519541 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| Geodia_barretti_n_2022_12 | 144.8Mb | Scaffold | 2024 | CASHTH01 | pharmaceutical biosciences, uppsala university | PRJEB58046 | 71.50% | 31,884 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Whole genome sequence of the deep-sea sponge Geodia barretti (Metazoa, Porifera, Demospongiae) | G3 (Bethesda) | 37619978 |
| Gene ID | Description |
|---|---|
| CAI8046021.1 | |
| CAI8046020.1 | |
| CAI8046023.1 | INTELECTIN |
| CAI8046024.1 | |
| CAI8046025.1 | |
| CAI8046026.1 | |
| CAI8046027.1 | |
| CAI8046028.1 | |
| CAI8046029.1 | |
| CAI8046030.1 | |
| CAI8046035.1 | TYROSINE-PROTEIN KINASE RECEPTOR |
| CAI8046034.1 | TYROSINE-PROTEIN KINASE RECEPTOR |
| CAI8046033.1 | TYROSINE-PROTEIN KINASE RECEPTOR |
| CAI8046031.1 | TYROSINE-PROTEIN KINASE RECEPTOR |
| CAI8046032.1 | TYROSINE-PROTEIN KINASE RECEPTOR |
| CAI8046036.1 | |
| CAI8046037.1 | |
| CAI8046038.1 | PROTEIN SIDEKICK |
| CAI8046040.1 | SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED |
| CAI8046039.1 | E3 UBIQUITIN-PROTEIN LIGASE NHLRC1-RELATED |
| CAI8046041.1 | SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED |
| CAI8046042.1 | FRIZZLED |
| CAI8046043.1 | PROTEIN DIAPHANOUS |
| CAI8046045.1 | |
| CAI8046044.1 | |
| CAI8046046.1 | COLLAGEN ALPHA |
| CAI8046047.1 | CYTOSINE DEAMINASE FAMILY MEMBER |
| CAI8046050.1 | COLLAGEN ALPHA |
| CAI8046049.1 | COLLAGEN ALPHA |
| CAI8046051.1 | COLLAGEN ALPHA |
| CAI8046048.1 | COLLAGEN ALPHA |
| CAI8046052.1 | COLLAGEN ALPHA |
| CAI8046053.1 | |
| CAI8046055.1 | |
| CAI8046056.1 | |
| CAI8046054.1 | |
| CAI8046057.1 | E3 UBIQUITIN-PROTEIN LIGASE NHLRC1-RELATED |
| CAI8046058.1 | PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4 |
| CAI8046068.1 | TYROSINE-PROTEIN KINASE RECEPTOR |
| CAI8046067.1 | TYROSINE-PROTEIN KINASE RECEPTOR |
| CAI8046066.1 | TYROSINE-PROTEIN KINASE RECEPTOR |
| CAI8046069.1 | TYROSINE-PROTEIN KINASE RECEPTOR |
| CAI8046070.1 | TYROSINE-PROTEIN KINASE RECEPTOR |
| CAI8046071.1 | TYROSINE-PROTEIN KINASE RECEPTOR |
| CAI8046064.1 | TYROSINE-PROTEIN KINASE RECEPTOR |
| CAI8046063.1 | TYROSINE-PROTEIN KINASE RECEPTOR |
| CAI8046065.1 | TYROSINE-PROTEIN KINASE RECEPTOR |
| CAI8046062.1 | TYROSINE-PROTEIN KINASE RECEPTOR |
| CAI8046059.1 | TYROSINE-PROTEIN KINASE RECEPTOR |
| CAI8046061.1 | TYROSINE-PROTEIN KINASE RECEPTOR |
