Geodia barretti is a species of deep-sea sponge in the family Geodiidae, commonly found in cold-water ecosystems of the North Atlantic Ocean. This species thrives in nutrient-rich, cold-water environments and plays a crucial role in deep-sea ecosystems by filtering large volumes of water, contributing to nutrient cycling, and providing habitat for various marine organisms. Its unique adaptations to cold and high-pressure conditions make it an important subject for studying deep-sea biodiversity and ecological processes.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Geodia barretti | Porifera | deep-sea sponge | Deep sea | 30-2000 | Kosterfjord National Park, Sweden, West of Yttre Vattenholmen (58.876233, 11.101483) | 519541 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| Geodia_barretti_n_2022_12 | 144.8Mb | Scaffold | 2024 | CASHTH01 | pharmaceutical biosciences, uppsala university | PRJEB58046 | 71.50% | 31,884 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Whole genome sequence of the deep-sea sponge Geodia barretti (Metazoa, Porifera, Demospongiae) | G3 (Bethesda) | 37619978 |
| Gene ID | Description |
|---|---|
| CAI8045822.1 | N-ALPHA-ACETYLTRANSFERASE |
| CAI8045821.1 | |
| CAI8045823.1 | |
| CAI8045826.1 | |
| CAI8045825.1 | |
| CAI8045824.1 | |
| CAI8045833.1 | NH 3 /GLUTAMINE-DEPENDENT NAD + SYNTHETASE |
| CAI8045832.1 | NH 3 /GLUTAMINE-DEPENDENT NAD + SYNTHETASE |
| CAI8045831.1 | NH 3 /GLUTAMINE-DEPENDENT NAD + SYNTHETASE |
| CAI8045830.1 | NH 3 /GLUTAMINE-DEPENDENT NAD + SYNTHETASE |
| CAI8045829.1 | NH 3 /GLUTAMINE-DEPENDENT NAD + SYNTHETASE |
| CAI8045828.1 | NH 3 /GLUTAMINE-DEPENDENT NAD + SYNTHETASE |
| CAI8045827.1 | NH 3 /GLUTAMINE-DEPENDENT NAD + SYNTHETASE |
| CAI8045834.1 | PROTEIN PHOSPHATASE 1 REGULATORY SUBUNIT 32 |
| CAI8045835.1 | PROTEIN PHOSPHATASE 1 REGULATORY SUBUNIT 32 |
| CAI8045839.1 | PROTEIN PHOSPHATASE 1 REGULATORY SUBUNIT 12 |
| CAI8045838.1 | PROTEIN PHOSPHATASE 1 REGULATORY SUBUNIT 12 |
| CAI8045837.1 | PROTEIN PHOSPHATASE 1 REGULATORY SUBUNIT 12 |
| CAI8045836.1 | PROTEIN PHOSPHATASE 1 REGULATORY SUBUNIT 12 |
| CAI8045840.1 | PROTEIN PHOSPHATASE 1 REGULATORY SUBUNIT 12 |
| CAI8045841.1 | PROTEIN KASH5 |
| CAI8045843.1 | PROTEIN KASH5 |
| CAI8045842.1 | |
| CAI8045845.1 | RNA HELICASE |
| CAI8045844.1 | RNA HELICASE |
| CAI8045846.1 | |
| CAI8045847.1 | FRUCTOSE-2,6-BISPHOSPHATASE TIGAR |
| CAI8045848.1 | TYROSINE-PROTEIN KINASE RECEPTOR |
| CAI8045849.1 | |
| CAI8045850.1 | |
| CAI8045851.1 | UNCHARACTERIZED |
| CAI8045852.1 | |
| CAI8045856.1 | |
| CAI8045855.1 | |
| CAI8045854.1 | |
| CAI8045853.1 | |
| CAI8045857.1 | |
| CAI8045858.1 | |
| CAI8045859.1 | |
| CAI8045860.1 | RECA |
| CAI8045861.1 | RIBONUCLEASE Y |
| CAI8045863.1 | RIBONUCLEASE Y |
| CAI8045862.1 | RIBONUCLEASE Y |
| CAI8045864.1 | |
| CAI8045865.1 | 3-HYDROXYACYL-[ACYL-CARRIER-PROTEIN] DEHYDRATASE |
| CAI8045866.1 | 3-HYDROXYACYL-[ACYL-CARRIER-PROTEIN] DEHYDRATASE |
| CAI8045867.1 | 3-HYDROXYACYL-[ACYL-CARRIER-PROTEIN] DEHYDRATASE |
| CAI8045868.1 | CARBOXYLASE:PYRUVATE/ACETYL-COA/PROPIONYL-COA CARBOXYLASE |
| CAI8045869.1 | GLUCOSE-METHANOL-CHOLINE GMC OXIDOREDUCTASE |
| CAI8045870.1 | MAJOR FACILITATOR SUPERFAMILY MULTIDRUG TRANSPORTER MFSC |
