Geodia barretti is a species of deep-sea sponge in the family Geodiidae, commonly found in cold-water ecosystems of the North Atlantic Ocean. This species thrives in nutrient-rich, cold-water environments and plays a crucial role in deep-sea ecosystems by filtering large volumes of water, contributing to nutrient cycling, and providing habitat for various marine organisms. Its unique adaptations to cold and high-pressure conditions make it an important subject for studying deep-sea biodiversity and ecological processes.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Geodia barretti | Porifera | deep-sea sponge | Deep sea | 30-2000 | Kosterfjord National Park, Sweden, West of Yttre Vattenholmen (58.876233, 11.101483) | 519541 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| Geodia_barretti_n_2022_12 | 144.8Mb | Scaffold | 2024 | CASHTH01 | pharmaceutical biosciences, uppsala university | PRJEB58046 | 71.50% | 31,884 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Whole genome sequence of the deep-sea sponge Geodia barretti (Metazoa, Porifera, Demospongiae) | G3 (Bethesda) | 37619978 |
| Gene ID | Description |
|---|---|
| CAI8045621.1 | UNCHARACTERIZED |
| CAI8045622.1 | UNCHARACTERIZED |
| CAI8045623.1 | UNCHARACTERIZED |
| CAI8045624.1 | UNCHARACTERIZED |
| CAI8045625.1 | MAJOR FACILITATOR SUPERFAMILY DOMAIN-CONTAINING PROTEIN 10 |
| CAI8045628.1 | MAJOR FACILITATOR SUPERFAMILY DOMAIN-CONTAINING PROTEIN 10 |
| CAI8045626.1 | MAJOR FACILITATOR SUPERFAMILY DOMAIN-CONTAINING PROTEIN 10 |
| CAI8045629.1 | MAJOR FACILITATOR SUPERFAMILY DOMAIN-CONTAINING PROTEIN 10 |
| CAI8045627.1 | MAJOR FACILITATOR SUPERFAMILY DOMAIN-CONTAINING PROTEIN 10 |
| CAI8045631.1 | INTEGRAL MEMBRANE PROTEIN GPR177 |
| CAI8045630.1 | INTEGRAL MEMBRANE PROTEIN GPR177 |
| CAI8045632.1 | ADHESION G-PROTEIN COUPLED RECEPTOR |
| CAI8045633.1 | |
| CAI8045634.1 | |
| CAI8045639.1 | BACTERICIDAL PERMEABILITY-INCREASING BPI PROTEIN-RELATED |
| CAI8045638.1 | BACTERICIDAL PERMEABILITY-INCREASING BPI PROTEIN-RELATED |
| CAI8045637.1 | BACTERICIDAL PERMEABILITY-INCREASING BPI PROTEIN-RELATED |
| CAI8045636.1 | BACTERICIDAL PERMEABILITY-INCREASING BPI PROTEIN-RELATED |
| CAI8045640.1 | BACTERICIDAL PERMEABILITY-INCREASING BPI PROTEIN-RELATED |
| CAI8045635.1 | BACTERICIDAL PERMEABILITY-INCREASING BPI PROTEIN-RELATED |
| CAI8045641.1 | |
| CAI8045642.1 | BACTERICIDAL PERMEABILITY-INCREASING BPI PROTEIN-RELATED |
| CAI8045643.1 | OS06G0309200 PROTEIN |
| CAI8045644.1 | CONTACTIN 5 |
| CAI8045645.1 | CONTACTIN 5 |
| CAI8045648.1 | UNCHARACTERIZED |
| CAI8045649.1 | UNCHARACTERIZED |
| CAI8045647.1 | UNCHARACTERIZED |
| CAI8045646.1 | |
| CAI8045651.1 | |
| CAI8045650.1 | |
| CAI8045653.1 | ACETYLGLUCOSAMINYLTRANSFERASE |
| CAI8045652.1 | ACETYLGLUCOSAMINYLTRANSFERASE |
| CAI8045654.1 | ACETYLGLUCOSAMINYLTRANSFERASE |
| CAI8045655.1 | ACETYLGLUCOSAMINYLTRANSFERASE |
| CAI8045657.1 | |
| CAI8045656.1 | |
| CAI8045659.1 | |
| CAI8045658.1 | |
| CAI8045660.1 | SODIUM/POTASSIUM-TRANSPORTING ATPASE SUBUNIT ALPHA |
| CAI8045661.1 | SODIUM/POTASSIUM-TRANSPORTING ATPASE SUBUNIT ALPHA |
| CAI8045662.1 | SODIUM/POTASSIUM-TRANSPORTING ATPASE SUBUNIT ALPHA |
| CAI8045663.1 | |
| CAI8045664.1 | MAP KINASE KINASE KINASE SSK2-RELATED-RELATED |
| CAI8045665.1 | |
| CAI8045666.1 | ANKYRIN REPEAT DOMAIN-CONTAINING PROTEIN 39-RELATED |
| CAI8045667.1 | ANKYRIN REPEAT DOMAIN-CONTAINING PROTEIN 39-RELATED |
| CAI8045668.1 | METHIONINE SYNTHASE |
| CAI8045669.1 | |
| CAI8045670.1 |
