Geodia barretti is a species of deep-sea sponge in the family Geodiidae, commonly found in cold-water ecosystems of the North Atlantic Ocean. This species thrives in nutrient-rich, cold-water environments and plays a crucial role in deep-sea ecosystems by filtering large volumes of water, contributing to nutrient cycling, and providing habitat for various marine organisms. Its unique adaptations to cold and high-pressure conditions make it an important subject for studying deep-sea biodiversity and ecological processes.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Geodia barretti | Porifera | deep-sea sponge | Deep sea | 30-2000 | Kosterfjord National Park, Sweden, West of Yttre Vattenholmen (58.876233, 11.101483) | 519541 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| Geodia_barretti_n_2022_12 | 144.8Mb | Scaffold | 2024 | CASHTH01 | pharmaceutical biosciences, uppsala university | PRJEB58046 | 71.50% | 31,884 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Whole genome sequence of the deep-sea sponge Geodia barretti (Metazoa, Porifera, Demospongiae) | G3 (Bethesda) | 37619978 |
| Gene ID | Description |
|---|---|
| CAI8045420.1 | |
| CAI8045421.1 | |
| CAI8045423.1 | |
| CAI8045424.1 | DEHYDROGENASES, SHORT CHAIN |
| CAI8045426.1 | ACYL-COENZYME A SYNTHETASE |
| CAI8045425.1 | ACYL-COENZYME A SYNTHETASE |
| CAI8045427.1 | ACYL-COENZYME A SYNTHETASE |
| CAI8045428.1 | THIAZOLE SYNTHASE |
| CAI8045429.1 | THIAZOLE SYNTHASE |
| CAI8045430.1 | THIAZOLE SYNTHASE |
| CAI8045431.1 | THIAMINE-PHOSPHATE PYROPHOSPHORYLASE |
| CAI8045432.1 | SULFUR CARRIER PROTEIN THIS |
| CAI8045433.1 | |
| CAI8045434.1 | LIPOPROTEIN-RELEASING SYSTEM ATP-BINDING PROTEIN LOLD |
| CAI8045438.1 | |
| CAI8045437.1 | |
| CAI8045436.1 | |
| CAI8045435.1 | |
| CAI8045439.1 | |
| CAI8045440.1 | |
| CAI8045441.1 | |
| CAI8045442.1 | |
| CAI8045443.1 | - |
| CAI8045445.1 | |
| CAI8045444.1 | |
| CAI8045446.1 | ABC TRANSPORTER ATP-BINDING PROTEIN |
| CAI8045447.1 | |
| CAI8045448.1 | BCDNA.GH03377 |
| CAI8045449.1 | NUCLEOTIDE-BINDING PROTEIN NBP35 YEAST -RELATED |
| CAI8045450.1 | NUCLEOTIDE-BINDING PROTEIN NBP35 YEAST -RELATED |
| CAI8045451.1 | CELL SURFACE PROTEIN |
| CAI8045452.1 | |
| CAI8045453.1 | UNIVERSAL STRESS PROTEIN SLR1230 |
| CAI8045454.1 | ELECTRON TRANSPORT PROTIN SCO1/SENC FAMILY MEMBER |
| CAI8045456.1 | PROTOHEME IX FARNESYLTRANSFERASE, MITOCHONDRIAL |
| CAI8045455.1 | PROTOHEME IX FARNESYLTRANSFERASE, MITOCHONDRIAL |
| CAI8045457.1 | CYTOCHROME C OXIDASE SUBUNIT 1 |
| CAI8045459.1 | LINEARMYCIN RESISTANCE ATP-BINDING PROTEIN LNRL |
| CAI8045458.1 | LINEARMYCIN RESISTANCE ATP-BINDING PROTEIN LNRL |
| CAI8045460.1 | |
| CAI8045461.1 | |
| CAI8045463.1 | BNR/ASP-BOX REPEAT FAMILY PROTEIN |
| CAI8045464.1 | BNR/ASP-BOX REPEAT FAMILY PROTEIN |
| CAI8045465.1 | BNR/ASP-BOX REPEAT FAMILY PROTEIN |
| CAI8045462.1 | BNR/ASP-BOX REPEAT FAMILY PROTEIN |
| CAI8045466.1 | 60S RIBOSOMAL PROTEIN L11-RELATED |
| CAI8045467.1 | UNCHARACTERIZED |
| CAI8045468.1 | NEURALIZED |
| CAI8045469.1 | UNCHARACTERIZED |
| CAI8045470.1 | ER LUMEN PROTEIN RETAINING RECEPTOR |
