About Geodia barretti

Geodia barretti is a species of deep-sea sponge in the family Geodiidae, commonly found in cold-water ecosystems of the North Atlantic Ocean. This species thrives in nutrient-rich, cold-water environments and plays a crucial role in deep-sea ecosystems by filtering large volumes of water, contributing to nutrient cycling, and providing habitat for various marine organisms. Its unique adaptations to cold and high-pressure conditions make it an important subject for studying deep-sea biodiversity and ecological processes.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Geodia barrettiPoriferadeep-sea spongeDeep sea30-2000Kosterfjord National Park, Sweden, West of Yttre Vattenholmen (58.876233, 11.101483)519541

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Geodia_barretti_n_2022_12144.8MbScaffold2024CASHTH01pharmaceutical biosciences, uppsala universityPRJEB5804671.50%31,884

References
TitleJournalPubmed ID
Whole genome sequence of the deep-sea sponge Geodia barretti (Metazoa, Porifera, Demospongiae)G3 (Bethesda)37619978

Gene Information

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Gene IDDescription
CAI8046221.1
CAI8046222.1
CAI8046223.1
CAI8046224.1SEGMENT POLARITY PROTEIN DISHEVELLED
CAI8046225.1
CAI8046226.1
CAI8046230.1INVERTED FORMIN-2
CAI8046231.1INVERTED FORMIN-2
CAI8046229.1INVERTED FORMIN-2
CAI8046228.1
CAI8046232.1INVERTED FORMIN-2
CAI8046233.1
CAI8046227.1
CAI8046234.1
CAI8046235.1
CAI8046236.1
CAI8046237.1INHIBITOR OF GROWTH PROTEIN
CAI8046243.1INHIBITOR OF GROWTH PROTEIN
CAI8046239.1INHIBITOR OF GROWTH PROTEIN
CAI8046240.1INHIBITOR OF GROWTH PROTEIN
CAI8046241.1INHIBITOR OF GROWTH PROTEIN
CAI8046244.1INHIBITOR OF GROWTH PROTEIN
CAI8046242.1INHIBITOR OF GROWTH PROTEIN
CAI8046238.1INHIBITOR OF GROWTH PROTEIN
CAI8046245.1
CAI8046246.1
CAI8046247.1
CAI8046248.1
CAI8046249.1
CAI8046250.1
CAI8046251.1
CAI8046252.1
CAI8046253.1
CAI8046254.1
CAI8046255.1
CAI8046256.1
CAI8046257.1
CAI8046258.1
CAI8046259.1E3 UBIQUITIN-PROTEIN LIGASE TTC3
CAI8046261.1SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED
CAI8046260.1
CAI8046262.1
CAI8046263.1
CAI8046264.1MITOCHONDRIAL RIBOSOMAL PROTEIN L37
CAI8046265.1ROLLING PEBBLES, ISOFORM B
CAI8046266.1
CAI8046267.1
CAI8046268.1UNCHARACTERIZED
CAI8046269.1SERINE/THREONINE-PROTEIN PHOSPHATASE PP2A 65 KDA REGULATORY SUBUNIT
CAI8046270.1-
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