Geodia barretti is a species of deep-sea sponge in the family Geodiidae, commonly found in cold-water ecosystems of the North Atlantic Ocean. This species thrives in nutrient-rich, cold-water environments and plays a crucial role in deep-sea ecosystems by filtering large volumes of water, contributing to nutrient cycling, and providing habitat for various marine organisms. Its unique adaptations to cold and high-pressure conditions make it an important subject for studying deep-sea biodiversity and ecological processes.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Geodia barretti | Porifera | deep-sea sponge | Deep sea | 30-2000 | Kosterfjord National Park, Sweden, West of Yttre Vattenholmen (58.876233, 11.101483) | 519541 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| Geodia_barretti_n_2022_12 | 144.8Mb | Scaffold | 2024 | CASHTH01 | pharmaceutical biosciences, uppsala university | PRJEB58046 | 71.50% | 31,884 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Whole genome sequence of the deep-sea sponge Geodia barretti (Metazoa, Porifera, Demospongiae) | G3 (Bethesda) | 37619978 |
| Gene ID | Description |
|---|---|
| CAI8046571.1 | |
| CAI8046573.1 | |
| CAI8046572.1 | |
| CAI8046574.1 | |
| CAI8046575.1 | E3 UBIQUITIN-PROTEIN LIGASE MIB2 |
| CAI8046576.1 | E3 UBIQUITIN-PROTEIN LIGASE MIB2 |
| CAI8046577.1 | CALCIUM BINDING PROTEINS |
| CAI8046578.1 | |
| CAI8046579.1 | |
| CAI8046580.1 | FORMIMINOTRANSFERASE-CYCLODEAMINASE |
| CAI8046581.1 | |
| CAI8046582.1 | UBIQUITIN CARBOXYL-TERMINAL HYDROLASE |
| CAI8046587.1 | SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED |
| CAI8046590.1 | SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED |
| CAI8046585.1 | SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED |
| CAI8046588.1 | SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED |
| CAI8046589.1 | SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED |
| CAI8046586.1 | SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED |
| CAI8046583.1 | SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED |
| CAI8046584.1 | SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED |
| CAI8046591.1 | |
| CAI8046593.1 | ANKYRIN REPEAT FAMILY A |
| CAI8046592.1 | |
| CAI8046594.1 | LIPOXYGENASE |
| CAI8046595.1 | LIPOXYGENASE |
| CAI8046596.1 | LIPOXYGENASE |
| CAI8046597.1 | |
| CAI8046599.1 | |
| CAI8046601.1 | |
| CAI8046600.1 | |
| CAI8046602.1 | |
| CAI8046604.1 | |
| CAI8046603.1 | |
| CAI8046598.1 | |
| CAI8046605.1 | |
| CAI8046612.1 | |
| CAI8046611.1 | |
| CAI8046608.1 | |
| CAI8046607.1 | CARCINOEMBRYONIC ANTIGEN-RELATED CELL ADHESION MOLECULE 19 |
| CAI8046606.1 | CARCINOEMBRYONIC ANTIGEN-RELATED CELL ADHESION MOLECULE 19 |
| CAI8046609.1 | |
| CAI8046610.1 | |
| CAI8046613.1 | |
| CAI8046614.1 | |
| CAI8046615.1 | |
| CAI8046616.1 | |
| CAI8046617.1 | |
| CAI8046618.1 | ADHESION G PROTEIN-COUPLED RECEPTOR G7 |
| CAI8046619.1 | |
| CAI8046620.1 | UNCHARACTERIZED |
