Geodia barretti is a species of deep-sea sponge in the family Geodiidae, commonly found in cold-water ecosystems of the North Atlantic Ocean. This species thrives in nutrient-rich, cold-water environments and plays a crucial role in deep-sea ecosystems by filtering large volumes of water, contributing to nutrient cycling, and providing habitat for various marine organisms. Its unique adaptations to cold and high-pressure conditions make it an important subject for studying deep-sea biodiversity and ecological processes.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Geodia barretti | Porifera | deep-sea sponge | Deep sea | 30-2000 | Kosterfjord National Park, Sweden, West of Yttre Vattenholmen (58.876233, 11.101483) | 519541 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| Geodia_barretti_n_2022_12 | 144.8Mb | Scaffold | 2024 | CASHTH01 | pharmaceutical biosciences, uppsala university | PRJEB58046 | 71.50% | 31,884 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Whole genome sequence of the deep-sea sponge Geodia barretti (Metazoa, Porifera, Demospongiae) | G3 (Bethesda) | 37619978 |
| Gene ID | Description |
|---|---|
| CAI8046921.1 | GLYCOLATE OXIDASE IRON-SULFUR SUBUNIT |
| CAI8046922.1 | RUBRERYTHRIN-RELATED |
| CAI8046923.1 | TRANSCRIPTIONAL DUAL REGULATOR HCAR-RELATED |
| CAI8046924.1 | |
| CAI8046925.1 | TAURINE IMPORT ATP-BINDING PROTEIN-RELATED |
| CAI8046926.1 | ENOYL-COA HYDRATASE-RELATED |
| CAI8046927.1 | - |
| CAI8046928.1 | PHENYLACETIC ACID DEGRADATION PROTEIN PAA |
| CAI8046929.1 | PHOSPHOENOLPYRUVATE CARBOXYLASE |
| CAI8046930.1 | |
| CAI8046931.1 | QUINONE OXIDOREDUCTASE PIG3-RELATED |
| CAI8046932.1 | D-ISOMER SPECIFIC 2-HYDROXYACID DEHYDROGENASE FAMILY PROTEIN (AFU_ORTHOLOGUE AFUA_6G10090) |
| CAI8046933.1 | L-2-HYDROXYGLUTARATE DEHYDROGENASE, MITOCHONDRIAL |
| CAI8046934.1 | L-2-HYDROXYGLUTARATE DEHYDROGENASE, MITOCHONDRIAL |
| CAI8046935.1 | FATTY ACID/PHOSPHOLIPID SYNTHESIS PROTEIN PLSX |
| CAI8046936.1 | 3-OXOACYL-(ACYL-CARRIER-PROTEIN) REDUCTASE |
| CAI8046937.1 | 3-OXOACYL-(ACYL-CARRIER-PROTEIN) REDUCTASE |
| CAI8046938.1 | 3-OXOACYL-(ACYL-CARRIER-PROTEIN) REDUCTASE |
| CAI8046939.1 | 3-OXOACYL-(ACYL-CARRIER-PROTEIN) REDUCTASE |
| CAI8046940.1 | PHOSPHOENOLPYRUVATE CARBOXYLASE |
| CAI8046941.1 | PHOSPHOENOLPYRUVATE CARBOXYLASE |
| CAI8046942.1 | |
| CAI8046943.1 | |
| CAI8046944.1 | BIFUNCTIONAL PROTEIN PYRR |
| CAI8046945.1 | BIFUNCTIONAL PROTEIN PYRR |
| CAI8046946.1 | ORNITHINE CARBAMOYLTRANSFERASE, MITOCHONDRIAL |
| CAI8046947.1 | ALLANTOINASE |
| CAI8046948.1 | CARBAMOYLTRANSFERASE FAMILY MEMBER |
| CAI8046949.1 | CARBAMOYLTRANSFERASE FAMILY MEMBER |
| CAI8046951.1 | CARBAMOYLTRANSFERASE FAMILY MEMBER |
| CAI8046952.1 | CARBAMOYLTRANSFERASE FAMILY MEMBER |
| CAI8046950.1 | CARBAMOYLTRANSFERASE FAMILY MEMBER |
| CAI8046958.1 | CARBAMOYLTRANSFERASE FAMILY MEMBER |
| CAI8046956.1 | CARBAMOYLTRANSFERASE FAMILY MEMBER |
| CAI8046957.1 | CARBAMOYLTRANSFERASE FAMILY MEMBER |
| CAI8046954.1 | CARBAMOYLTRANSFERASE FAMILY MEMBER |
| CAI8046953.1 | CARBAMOYLTRANSFERASE FAMILY MEMBER |
| CAI8046955.1 | CARBAMOYLTRANSFERASE FAMILY MEMBER |
| CAI8046959.1 | CARBAMOYLTRANSFERASE FAMILY MEMBER |
| CAI8046960.1 | CARBAMOYLTRANSFERASE FAMILY MEMBER |
| CAI8046961.1 | CARBAMOYLTRANSFERASE FAMILY MEMBER |
| CAI8046962.1 | CARBAMOYLTRANSFERASE FAMILY MEMBER |
| CAI8046963.1 | CARBAMOYLTRANSFERASE FAMILY MEMBER |
| CAI8046964.1 | CARBAMOYLTRANSFERASE FAMILY MEMBER |
| CAI8046965.1 | |
| CAI8046967.1 | OROTIDINE 5'-PHOSPHATE DECARBOXYLASE |
| CAI8046966.1 | OROTIDINE 5'-PHOSPHATE DECARBOXYLASE |
| CAI8046968.1 | SUGAR FERMENTATION STIMULATION PROTEIN A |
| CAI8046969.1 | SUGAR FERMENTATION STIMULATION PROTEIN A |
| CAI8046970.1 | SUGAR FERMENTATION STIMULATION PROTEIN A |
