About Lamellibrachia satsuma

Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia satsumaAnnelidatube wormsCold seep110Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE)104711

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM3323900v1736MbScaffold2023BSQZ01Atmosphere and Ocean Research Institute, The University of TokyoPRJDB1419995.50%27,979

References
TitleJournalPubmed ID
Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsumaDNA Research37358253

Gene Information

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Gene IDDescription
Lsat_s007.g0338.t1N-LINKED OLIGOSACCHARIDE PROCESSING
Lsat_s007.g0339.t1MAP/MICROTUBULE AFFINITY-REGULATING KINASE
Lsat_s007.g0340.t1ASPARAGINE SYNTHETASE DOMAIN-CONTAINING PROTEIN 1
Lsat_s007.g0341.t1CALCIUM BINDING PROTEINS
Lsat_s007.g0342.t1ASPARAGINE SYNTHETASE DOMAIN-CONTAINING PROTEIN 1
Lsat_s007.g0343.t1
Lsat_s007.g0344.t1LEUCOKININ RECEPTOR-RELATED
Lsat_s007.g0345.t1LEUCINE-RICH REPEAT, ISOFORM F-RELATED
Lsat_s007.g0346.t1COLORECTAL MUTANT CANCER PROTEIN MCC PROTEIN -RELATED
Lsat_s007.g0347.t1RIBOSOMAL PROTEIN S6 KINASE
Lsat_s007.g0348.t1
Lsat_s007.g0349.t1FORKHEAD BOX PROTEIN
Lsat_s007.g0350.t1U4/U6-ASSOCIATED RNA SPLICING FACTOR-RELATED
Lsat_s007.g0351.t1HEPARAN SULFATE 2-O-SULFOTRANSFERASE
Lsat_s007.g0352.t1HEPARAN SULFATE 2-O-SULFOTRANSFERASE
Lsat_s007.g0353.t1HEPARAN SULFATE 2-O-SULFOTRANSFERASE
Lsat_s007.g0354.t1
Lsat_s007.g0355.t1HEPARAN SULFATE 2-O-SULFOTRANSFERASE
Lsat_s007.g0356.t1HEPARAN SULFATE 2-O-SULFOTRANSFERASE
Lsat_s007.g0357.t1COLON CANCER-ASSOCIATED PROTEIN MIC1
Lsat_s007.g0358.t1FATTY ACID ACYL TRANSFERASE-RELATED
Lsat_s007.g0359.t1PHOSPHATIDYLETHANOLAMINE-BINDING PROTEIN
Lsat_s007.g0360.t1EG:80H7.2 PROTEIN
Lsat_s007.g0361.t1
Lsat_s007.g0362.t1
Lsat_s007.g0363.t1
Lsat_s007.g0364.t1GENERAL TRANSCRIPTION FACTOR IIF SUBUNIT 2
Lsat_s007.g0365.t1XK-RELATED PROTEIN
Lsat_s007.g0366.t1
Lsat_s007.g0367.t1
Lsat_s007.g0368.t1TRANSMEMBRANE PROTEIN 68
Lsat_s007.g0369.t1XK-RELATED PROTEIN
Lsat_s007.g0370.t1
Lsat_s007.g0371.t1L-THREONINE 3-DEHYDROGENASE
Lsat_s007.g0372.t1
Lsat_s007.g0373.t1
Lsat_s007.g0374.t1L-THREONINE 3-DEHYDROGENASE
Lsat_s007.g0375.t1PROTEIN PHOSPHATASE 2C
Lsat_s007.g0376.t1SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED
Lsat_s007.g0377.t1SPINDLE ASSEMBLY ABNORMAL PROTEIN 6 HOMOLOG
Lsat_s007.g0378.t1
Lsat_s007.g0379.t1DED DOMAIN-CONTAINING PROTEIN
Lsat_s007.g0380.t1PROTEIN SSUH2 HOMOLOG
Lsat_s007.g0381.t1(E3-INDEPENDENT) E2 UBIQUITIN-CONJUGATING ENZYME
Lsat_s007.g0382.t1UNCHARACTERIZED
Lsat_s007.g0383.t1CELL DIVISION CONTROL PROTEIN 6-RELATED
Lsat_s007.g0384.t1EGF-LIKE DOMAIN-CONTAINING PROTEIN
Lsat_s007.g0385.t1EXTRACELLULAR MATRIX GLYCOPROTEIN RELATED
Lsat_s007.g0386.t1
Lsat_s007.g0387.t1NOTCH LIGAND FAMILY MEMBER
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