Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Lamellibrachia satsuma | Annelida | tube worms | Cold seep | 110 | Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE) | 104711 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM3323900v1 | 736Mb | Scaffold | 2023 | BSQZ01 | Atmosphere and Ocean Research Institute, The University of Tokyo | PRJDB14199 | 95.50% | 27,979 |
Title | Journal | Pubmed ID |
---|---|---|
Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsuma | DNA Research | 37358253 |
Gene ID | Description |
---|---|
Lsat_s007.g0238.t1 | |
Lsat_s007.g0239.t1 | |
Lsat_s007.g0240.t1 | KELCH PROTEIN |
Lsat_s007.g0241.t1 | KELCH PROTEIN |
Lsat_s007.g0242.t1 | HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED |
Lsat_s007.g0243.t1 | STG PROTEIN |
Lsat_s007.g0244.t1 | DNAJ HOMOLOG SUBFAMILY C MEMBER 14 |
Lsat_s007.g0245.t1 | |
Lsat_s007.g0246.t1 | GUANYLYL CYCLASE |
Lsat_s007.g0247.t1 | |
Lsat_s007.g0248.t1 | |
Lsat_s007.g0249.t1 | NATRIURETIC PEPTIDE RECEPTOR 3-RELATED |
Lsat_s007.g0250.t1 | |
Lsat_s007.g0251.t1 | NATRIURETIC PEPTIDE RECEPTOR 3-RELATED |
Lsat_s007.g0252.t1 | ANKYRIN REPEAT DOMAIN-CONTAINING PROTEIN 22 |
Lsat_s007.g0253.t1 | NATRIURETIC PEPTIDE RECEPTOR 3-RELATED |
Lsat_s007.g0254.t1 | |
Lsat_s007.g0255.t1 | NATRIURETIC PEPTIDE RECEPTOR 3-RELATED |
Lsat_s007.g0256.t1 | |
Lsat_s007.g0257.t1 | PROTEASE M3 THIMET OLIGOPEPTIDASE-RELATED |
Lsat_s007.g0258.t1 | |
Lsat_s007.g0259.t1 | PROTEIN PATCHED |
Lsat_s007.g0260.t1 | |
Lsat_s007.g0261.t1 | PROTEIN PATCHED |
Lsat_s007.g0262.t1 | AAA-FAMILY ATPASE |
Lsat_s007.g0263.t1 | LEPTIN RECEPTOR-RELATED |
Lsat_s007.g0264.t1 | UNCHARACTERIZED |
Lsat_s007.g0265.t1 | MEMBRALIN/KINETOCHORE PROTEIN NUF2 |
Lsat_s007.g0266.t1 | ACID PHOSPHATASE-RELATED |
Lsat_s007.g0267.t1 | |
Lsat_s007.g0268.t1 | ACID PHOSPHATASE-RELATED |
Lsat_s007.g0269.t1 | COMPLEMENT COMPONENT-RELATED SUSHI DOMAIN-CONTAINING |
Lsat_s007.g0270.t1 | ARMADILLO REPEAT-CONTAINING PROTEIN 7 |
Lsat_s007.g0271.t1 | MAP/MICROTUBULE AFFINITY-REGULATING KINASE |
Lsat_s007.g0272.t1 | 60S RIBOSOMAL PROTEIN L37 |
Lsat_s007.g0273.t1 | F-BOX ONLY PROTEIN 4 |
Lsat_s007.g0274.t1 | TFIIF-ALPHA |
Lsat_s007.g0275.t1 | |
Lsat_s007.g0276.t1 | ARRESTIN DOMAIN CONTAINING PROTEIN |
Lsat_s007.g0277.t1 | FATTY ACID AMIDE HYDROLASE |
Lsat_s007.g0278.t1 | SUPEROXIDE DISMUTASE CU-ZN -RELATED |
Lsat_s007.g0279.t1 | PROTEIN CBG04600 |
Lsat_s007.g0280.t1 | |
Lsat_s007.g0281.t1 | GH04942P |
Lsat_s007.g0282.t1 | GH04942P |
Lsat_s007.g0283.t1 | SMALL INTEGRAL MEMBRANE PROTEIN 7 |
Lsat_s007.g0284.t1 | |
Lsat_s007.g0285.t1 | MANNOSYL-OLIGOSACCHARIDE GLUCOSIDASE |
Lsat_s007.g0286.t1 | KRUEPPEL-LIKE TRANSCRIPTION FACTOR |
Lsat_s007.g0287.t1 |