Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Lamellibrachia satsuma | Annelida | tube worms | Cold seep | 110 | Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE) | 104711 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| ASM3323900v1 | 736Mb | Scaffold | 2023 | BSQZ01 | Atmosphere and Ocean Research Institute, The University of Tokyo | PRJDB14199 | 95.50% | 27,979 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsuma | DNA Research | 37358253 |
| Gene ID | Description |
|---|---|
| Lsat_s007.g0138.t1 | |
| Lsat_s007.g0139.t1 | |
| Lsat_s007.g0140.t1 | LD24721P |
| Lsat_s007.g0141.t1 | SERINE/ARGININE-RICH SPLICING FACTOR |
| Lsat_s007.g0142.t1 | EIF4G DOMAIN PROTEIN |
| Lsat_s007.g0143.t1 | PROTEIN EVA-1 |
| Lsat_s007.g0144.t1 | COMPLEMENT COMPONENT 1, S SUBCOMPONENT-RELATED |
| Lsat_s007.g0145.t1 | METHYLTETRAHYDROFOLATE:HOMOCYSTEINE METHYLTRANSFERASE RELATED |
| Lsat_s007.g0146.t1 | CHLORIDE CHANNEL CLIC-LIKE PROTEIN 1 |
| Lsat_s007.g0147.t1 | |
| Lsat_s007.g0148.t1 | |
| Lsat_s007.g0149.t1 | |
| Lsat_s007.g0150.t1 | UBIQUINOL-CYTOCHROME C REDUCTASE COMPLEX 7.8 KDA PROTEIN |
| Lsat_s007.g0151.t1 | BETA TRANSDUCIN-RELATED PROTEIN |
| Lsat_s007.g0152.t1 | ATP SYNTHASE DELTA/EPSILON CHAIN |
| Lsat_s007.g0153.t1 | MYOSIN LIGHT CHAIN 1, 3 |
| Lsat_s007.g0154.t1 | AQUAPORIN TRANSPORTER |
| Lsat_s007.g0155.t1 | |
| Lsat_s007.g0156.t1 | CYTOCHROME B561/FERRIC REDUCTASE TRANSMEMBRANE |
| Lsat_s007.g0157.t1 | |
| Lsat_s007.g0158.t1 | |
| Lsat_s007.g0159.t1 | |
| Lsat_s007.g0160.t1 | |
| Lsat_s007.g0161.t1 | |
| Lsat_s007.g0162.t1 | MATRIX PROTEIN, PUTATIVE-RELATED |
| Lsat_s007.g0163.t1 | |
| Lsat_s007.g0164.t1 | ADAMTS A DISINTEGRIN AND METALLOPROTEASE WITH THROMBOSPONDIN MOTIFS PROTEASE |
| Lsat_s007.g0165.t1 | |
| Lsat_s007.g0166.t1 | |
| Lsat_s007.g0167.t1 | |
| Lsat_s007.g0168.t1 | 41-2 PROTEIN ANTIGEN-RELATED |
| Lsat_s007.g0169.t1 | CELL DIVISION CYCLE 20 CDC20 FIZZY -RELATED |
| Lsat_s007.g0170.t1 | GLUTATHIONE PEROXIDASE |
| Lsat_s007.g0171.t1 | HUNTINGTIN-INTERACTING PROTEIN K FAMILY MEMBER |
| Lsat_s007.g0172.t1 | EXPRESSED PROTEIN |
| Lsat_s007.g0173.t1 | GTP-BINDING PROTEIN ALPHA SUBUNIT |
| Lsat_s007.g0174.t1 | |
| Lsat_s007.g0175.t1 | EGALITARIAN, ISOFORM B |
| Lsat_s007.g0176.t1 | COMPLEX III ASSEMBLY FACTOR LYRM7 |
| Lsat_s007.g0177.t1 | TRANSMEMBRANE PROTEIN 232 |
| Lsat_s007.g0178.t1 | GUANINE DEAMINASE |
| Lsat_s007.g0179.t1 | |
| Lsat_s007.g0180.t1 | G-PROTEIN COUPLED RECEPTOR |
| Lsat_s007.g0181.t1 | ZINC METALLOPROTEASE FAMILY M13 NEPRILYSIN-RELATED |
| Lsat_s007.g0182.t1 | ZINC METALLOPROTEASE FAMILY M13 NEPRILYSIN-RELATED |
| Lsat_s007.g0183.t1 | ZINC METALLOPROTEASE FAMILY M13 NEPRILYSIN-RELATED |
| Lsat_s007.g0184.t1 | |
| Lsat_s007.g0185.t1 | RAS-RELATED PROTEIN RAB |
| Lsat_s007.g0186.t1 | RIBULOKINASE |
| Lsat_s007.g0187.t1 | RAN BINDING PROTEIN |
