About Lamellibrachia satsuma

Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia satsumaAnnelidatube wormsCold seep110Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE)104711

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM3323900v1736MbScaffold2023BSQZ01Atmosphere and Ocean Research Institute, The University of TokyoPRJDB1419995.50%27,979

References
TitleJournalPubmed ID
Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsumaDNA Research37358253

Gene Information

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Gene IDDescription
Lsat_s006.g0501.t1UNCHARACTERIZED
Lsat_s006.g0502.t1
Lsat_s006.g0503.t1PRE-MRNA SPLICING FACTOR PRP31
Lsat_s006.g0504.t1
Lsat_s006.g0505.t1RETINOIC ACID INDUCED 1/TRANSCRIPTION FACTOR 20
Lsat_s006.g0506.t1MYOSIN HEAVY CHAIN, NON-MUSCLE
Lsat_s006.g0507.t1
Lsat_s006.g0508.t1
Lsat_s006.g0509.t1
Lsat_s006.g0510.t1
Lsat_s006.g0511.t1
Lsat_s006.g0512.t1
Lsat_s006.g0513.t1
Lsat_s006.g0514.t1
Lsat_s006.g0515.t1PORCUPINE
Lsat_s006.g0516.t1FACTOR VIII-ASSOCIATED GENE 1
Lsat_s006.g0517.t1ECSIT EVOLUTIONARILY CONSERVED SIGNALING INTERMEDIATE IN TOLL PATHWAYS
Lsat_s006.g0518.t1PHD FINGER PROTEIN
Lsat_s006.g0519.t1
Lsat_s006.g0520.t1
Lsat_s006.g0521.t1ALPHA-TOCOPHEROL TRANSFER PROTEIN-RELATED
Lsat_s006.g0522.t1
Lsat_s006.g0523.t1CELL FATE DETERMINING PROTEIN MAB21-RELATED
Lsat_s006.g0524.t1ALPHA-TOCOPHEROL TRANSFER PROTEIN-RELATED
Lsat_s006.g0525.t1ALPHA-TOCOPHEROL TRANSFER PROTEIN-RELATED
Lsat_s006.g0526.t1
Lsat_s006.g0527.t1ALPHA-TOCOPHEROL TRANSFER PROTEIN-RELATED
Lsat_s006.g0528.t1ALPHA-TOCOPHEROL TRANSFER PROTEIN-RELATED
Lsat_s006.g0529.t1PHD FINGER PROTEIN
Lsat_s006.g0530.t1
Lsat_s006.g0531.t1TRANSCRIPTION FACTOR MAF
Lsat_s006.g0532.t1RIBOSOME BIOGENESIS PROTEIN
Lsat_s006.g0533.t1UNCHARACTERIZED
Lsat_s006.g0534.t1UPF0561 PROTEIN C2ORF68
Lsat_s006.g0535.t1UBIQUITIN CARBOXYL-TERMINAL HYDROLASE
Lsat_s006.g0536.t1EF-HAND CALCIUM-BINDING DOMAIN-CONTAINING PROTEIN 6-RELATED
Lsat_s006.g0537.t1MATRIX PROTEIN, PUTATIVE-RELATED
Lsat_s006.g0538.t1ACTIN-RELATED PROTEIN 2/3 COMPLEX SUBUNIT 1
Lsat_s006.g0539.t1
Lsat_s006.g0540.t1
Lsat_s006.g0541.t1EPSIN/ENT-RELATED
Lsat_s006.g0542.t1TATA-BINDING PROTEIN-ASSOCIATED FACTOR 172
Lsat_s006.g0543.t1POLYCYSTIN FAMILY MEMBER
Lsat_s006.g0544.t1UPAR/LY6 DOMAIN-CONTAINING PROTEIN
Lsat_s006.g0545.t1CHITINASE
Lsat_s006.g0546.t1CHITINASE
Lsat_s006.g0547.t1
Lsat_s006.g0548.t1CHITINASE
Lsat_s006.g0549.t1CHITINASE
Lsat_s006.g0550.t1IG-LIKE DOMAIN-CONTAINING PROTEIN-RELATED
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