About Lamellibrachia satsuma

Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia satsumaAnnelidatube wormsCold seep110Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE)104711

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM3323900v1736MbScaffold2023BSQZ01Atmosphere and Ocean Research Institute, The University of TokyoPRJDB1419995.50%27,979

References
TitleJournalPubmed ID
Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsumaDNA Research37358253

Gene Information

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Gene IDDescription
Lsat_s006.g0201.t1
Lsat_s006.g0202.t1POLYCYSTIN FAMILY MEMBER
Lsat_s006.g0203.t1PETER PAN-RELATED
Lsat_s006.g0204.t1AGAP003710-PA
Lsat_s006.g0205.t1SEC24-RELATED PROTEIN
Lsat_s006.g0206.t1ALPHA- 1,3 -FUCOSYLTRANSFERASE
Lsat_s006.g0207.t1CADHERIN DOMAIN-CONTAINING PROTEIN
Lsat_s006.g0208.t1LD02310P
Lsat_s006.g0209.t1PREFOLDIN SUBUNIT 1-RELATED
Lsat_s006.g0210.t1ACONITATE HYDRATASE B
Lsat_s006.g0211.t1MODULATOR OF SMOOTHENED PROTEIN
Lsat_s006.g0212.t1CLUSTERIN ASSOCIATED PROTEIN 1
Lsat_s006.g0213.t1
Lsat_s006.g0214.t1ARMADILLO-LIKE HELICAL DOMAIN-CONTAINING PROTEIN 2
Lsat_s006.g0215.t1
Lsat_s006.g0216.t1WD-REPEAT PROTEIN INTERACTING WITH PHOSPHOINOSIDES WIPI -RELATED
Lsat_s006.g0217.t1ENOYL-COA HYDRATASE-RELATED
Lsat_s006.g0218.t1HEDGEHOG
Lsat_s006.g0219.t1
Lsat_s006.g0220.t1CADHERIN-23
Lsat_s006.g0221.t1CADHERIN-23
Lsat_s006.g0222.t1
Lsat_s006.g0223.t1CADHERIN-87A
Lsat_s006.g0224.t1
Lsat_s006.g0225.t1CHLORIDE CHANNEL PROTEIN CLC FAMILY MEMBER
Lsat_s006.g0226.t1PLECKSTRIN HOMOLOGY PH DOMAIN-CONTAINING PROTEIN
Lsat_s006.g0227.t1GEM-ASSOCIATED PROTEIN 6
Lsat_s006.g0228.t1ESOPHAGEAL CANCER ASSOCIATED PROTEIN
Lsat_s006.g0229.t1CHCHD1
Lsat_s006.g0230.t1
Lsat_s006.g0231.t1TGF-BETA FAMILY
Lsat_s006.g0232.t1
Lsat_s006.g0233.t1POLYCYSTIN-1
Lsat_s006.g0234.t1POLYCYSTIN FAMILY MEMBER
Lsat_s006.g0235.t1
Lsat_s006.g0236.t1
Lsat_s006.g0237.t1ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Lsat_s006.g0238.t1
Lsat_s006.g0239.t1THIOSULFATE SULFERTANSFERASE
Lsat_s006.g0240.t1PEROXISOMAL MEMBRANE PROTEIN PMP34-RELATED
Lsat_s006.g0241.t1ATP-BINDING CASSETTE SUB-FAMILY C
Lsat_s006.g0242.t1
Lsat_s006.g0243.t1ATP-BINDING CASSETTE SUB-FAMILY C
Lsat_s006.g0244.t1
Lsat_s006.g0245.t1G-PROTEIN COUPLED RECEPTOR
Lsat_s006.g0246.t1PROTEIN B, PUTATIVE-RELATED-RELATED
Lsat_s006.g0247.t1
Lsat_s006.g0248.t1
Lsat_s006.g0249.t1
Lsat_s006.g0250.t1RIBONUCLEASE P SUBUNIT P21
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