About Lamellibrachia satsuma

Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia satsumaAnnelidatube wormsCold seep110Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE)104711

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM3323900v1736MbScaffold2023BSQZ01Atmosphere and Ocean Research Institute, The University of TokyoPRJDB1419995.50%27,979

References
TitleJournalPubmed ID
Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsumaDNA Research37358253

Gene Information

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Gene IDDescription
Lsat_s006.g0251.t1CENTRIOLAR COILED-COIL PROTEIN OF 110 KDA
Lsat_s006.g0252.t1ATP-BINDING CASSETTE SUB-FAMILY C
Lsat_s006.g0253.t1UBIQUITIN LIGASE SPECIFICITY FACTOR/HREP PROTEIN
Lsat_s006.g0254.t1DYNEIN HEAVY CHAIN
Lsat_s006.g0255.t1DOUBLE-STRAND BREAK REPAIR PROTEIN MRE11
Lsat_s006.g0256.t1UPF0602 PROTEIN C4ORF47
Lsat_s006.g0257.t1
Lsat_s006.g0258.t1ENDONUCLEASE IV ENDODEOXYRIBONUCLEASE IV
Lsat_s006.g0259.t1DIACYLGLYCEROL LIPASE HOMOLOG-RELATED
Lsat_s006.g0260.t1GANGLIOSIDE INDUCED DIFFERENTIATION ASSOCIATED PROTEIN 2-RELATED
Lsat_s006.g0261.t1BIOGENESIS OF LYSOSOME-RELATED ORGANELLES COMPLEX 1 SUBUNIT 2
Lsat_s006.g0262.t1E3 UBIQUITIN-PROTEIN LIGASE PRAJA
Lsat_s006.g0263.t1RNA-BINDING (RRM/RBD/RNP MOTIFS) FAMILY PROTEIN
Lsat_s006.g0264.t1INOSITOL POLYPHOSPHATE KINASE
Lsat_s006.g0265.t1DEAD-BOX ATP-DEPENDENT RNA HELICASE 47, MITOCHONDRIAL
Lsat_s006.g0266.t1LEUCINE RICH REPEAT FAMILY PROTEIN
Lsat_s006.g0267.t1
Lsat_s006.g0268.t1ADIPOR/PROGESTIN RECEPTOR-RELATED
Lsat_s006.g0269.t1
Lsat_s006.g0270.t1PROLYL HYDROXYLASE-RELATED
Lsat_s006.g0271.t1RNA RECOGNITION MOTIF RRM DOMAIN CONTAINING PROTEIN
Lsat_s006.g0272.t1RNA RECOGNITION MOTIF RRM DOMAIN CONTAINING PROTEIN
Lsat_s006.g0273.t1LD33804P
Lsat_s006.g0274.t1KEREN-RELATED
Lsat_s006.g0275.t1PROTEIN PHOSPHATASE
Lsat_s006.g0276.t1
Lsat_s006.g0277.t1AGAP008228-PA
Lsat_s006.g0278.t1
Lsat_s006.g0279.t1UDP-GLUCOSE GLYCOPROTEIN:GLUCOSYLTRANSFERASE
Lsat_s006.g0280.t1
Lsat_s006.g0281.t1UDP-GLUCOSE GLYCOPROTEIN:GLUCOSYLTRANSFERASE
Lsat_s006.g0282.t1DNA2/NAM7 HELICASE FAMILY
Lsat_s006.g0283.t1DNA2/NAM7 HELICASE FAMILY
Lsat_s006.g0284.t1VON WILLEBRAND FACTOR A DOMAIN-CONTAINING PROTEIN 8
Lsat_s006.g0285.t1B9 DOMAIN-CONTAINING
Lsat_s006.g0286.t1
Lsat_s006.g0287.t1LEUCOKININ RECEPTOR-RELATED
Lsat_s006.g0288.t1
Lsat_s006.g0289.t1
Lsat_s006.g0290.t1ADAM10/ADAM17 METALLOPEPTIDASE FAMILY MEMBER
Lsat_s006.g0291.t1PHOSPHOLIPASE B-RELATED
Lsat_s006.g0292.t1DDB1- AND CUL4-ASSOCIATED FACTOR 12-RELATED
Lsat_s006.g0293.t1PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4
Lsat_s006.g0294.t1
Lsat_s006.g0295.t1DDB1- AND CUL4-ASSOCIATED FACTOR 12-RELATED
Lsat_s006.g0296.t1ULP_PROTEASE DOMAIN-CONTAINING PROTEIN
Lsat_s006.g0297.t1PROTEIN B, PUTATIVE-RELATED-RELATED
Lsat_s006.g0298.t1
Lsat_s006.g0299.t1
Lsat_s006.g0300.t1DDB1- AND CUL4-ASSOCIATED FACTOR 12-RELATED
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