Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Lamellibrachia satsuma | Annelida | tube worms | Cold seep | 110 | Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE) | 104711 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| ASM3323900v1 | 736Mb | Scaffold | 2023 | BSQZ01 | Atmosphere and Ocean Research Institute, The University of Tokyo | PRJDB14199 | 95.50% | 27,979 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsuma | DNA Research | 37358253 |
| Gene ID | Description |
|---|---|
| Lsat_s005.g0573.t1 | |
| Lsat_s005.g0574.t1 | SULFATE TRANSPORTER |
| Lsat_s005.g0575.t1 | EARLY GAMETOCYTE ENRICHED PHOSPHOPROTEIN EGXP |
| Lsat_s005.g0576.t1 | TETRATRICOPEPTIDE REPEAT PROTEIN (AFU_ORTHOLOGUE AFUA_6G03870) |
| Lsat_s005.g0577.t1 | CELL DIVISION CONTROL PROTEIN 6-RELATED |
| Lsat_s005.g0578.t1 | CELL CYCLE CONTROL PROTEIN CWF22-RELATED |
| Lsat_s005.g0579.t1 | ANKYRIN REPEAT FAMILY A |
| Lsat_s005.g0580.t1 | ATP-BINDING CASSETTE, SUB-FAMILY D MEMBER |
| Lsat_s005.g0581.t1 | |
| Lsat_s005.g0582.t1 | TRANSFORMING GROWTH FACTOR-BETA RECEPTOR TYPE I AND II |
| Lsat_s005.g0583.t1 | GABA-B RECEPTOR |
| Lsat_s005.g0584.t1 | GUANYLYL CYCLASE |
| Lsat_s005.g0585.t1 | |
| Lsat_s005.g0586.t1 | |
| Lsat_s005.g0587.t1 | GUANYLYL CYCLASE |
| Lsat_s005.g0588.t1 | FANCONI ANEMIA GROUP E PROTEIN |
| Lsat_s005.g0589.t1 | GH11727P |
| Lsat_s005.g0590.t1 | |
| Lsat_s005.g0591.t1 | TESTIS-EXPRESSED PROTEIN 52 |
| Lsat_s005.g0592.t1 | MIP11318P |
| Lsat_s005.g0593.t1 | TRANSMEMBRANE PROTEIN 249 |
| Lsat_s005.g0594.t1 | EGF-LIKE DOMAIN-CONTAINING PROTEIN |
| Lsat_s005.g0595.t1 | TRANSMEMBRANE PROTEIN |
| Lsat_s005.g0596.t1 | ADAM A DISINTEGRIN AND METALLOPROTEASE DOMAIN |
| Lsat_s005.g0597.t1 | RHO GDP-DISSOCIATION INHIBITOR |
| Lsat_s005.g0598.t1 | EPM2A-INTERACTING PROTEIN 1 |
| Lsat_s005.g0599.t1 | FAD NADPH DEHYDROGENASE/OXIDOREDUCTASE |
| Lsat_s005.g0600.t1 | SAD1/UNC-84-LIKE PROTEIN-RELATED |
| Lsat_s005.g0601.t1 | RECA/RAD51/RADA DNA STRAND-PAIRING FAMILY MEMBER |
| Lsat_s005.g0602.t1 | RIBOSOMAL PROTEIN L7AE FAMILY MEMBER |
| Lsat_s005.g0603.t1 | |
| Lsat_s005.g0604.t1 | SODIUM/CALCIUM EXCHANGER |
| Lsat_s005.g0605.t1 | RAB11-FAMILY INTERACTING PROTEIN |
| Lsat_s005.g0606.t1 | |
| Lsat_s005.g0607.t1 | WD-40 REPEAT PROTEIN |
| Lsat_s005.g0608.t1 | CHECKPOINT SUPPRESSOR 1-LIKE, ISOFORM A-RELATED |
| Lsat_s005.g0609.t1 | METEORIN-LIKE PROTEIN |
| Lsat_s005.g0610.t1 | |
| Lsat_s005.g0611.t1 | DIACYLGLYCEROL KINASE |
| Lsat_s005.g0612.t1 | |
| Lsat_s005.g0613.t1 | AMILORIDE-SENSITIVE SODIUM CHANNEL-RELATED |
| Lsat_s005.g0614.t1 | |
| Lsat_s005.g0615.t1 | |
| Lsat_s005.g0616.t1 | AAA DOMAIN-CONTAINING |
| Lsat_s005.g0617.t1 | TNFAIP3-INTERACTING PROTEIN COILED COIL FAMILY MEMBER |
| Lsat_s005.g0618.t1 | DYNACTIN P62 SUBUNIT |
| Lsat_s005.g0619.t1 | BOLA TRANSCRIPTION REGULATOR |
| Lsat_s005.g0620.t1 | AGAP001581-PA |
| Lsat_s005.g0621.t1 | |
| Lsat_s005.g0622.t1 | PROTEIN CBG12054-RELATED |
