Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Lamellibrachia satsuma | Annelida | tube worms | Cold seep | 110 | Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE) | 104711 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| ASM3323900v1 | 736Mb | Scaffold | 2023 | BSQZ01 | Atmosphere and Ocean Research Institute, The University of Tokyo | PRJDB14199 | 95.50% | 27,979 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsuma | DNA Research | 37358253 |
| Gene ID | Description |
|---|---|
| Lsat_s005.g0323.t1 | METHYLTRANSFERASE, FKBM FAMILY PROTEIN |
| Lsat_s005.g0324.t1 | |
| Lsat_s005.g0325.t1 | |
| Lsat_s005.g0326.t1 | BETA-1,4-GALACTOSYLTRANSFERASE |
| Lsat_s005.g0327.t1 | MEMBRANE-ASSOCIATED GUANYLATE KINASE MAGUK |
| Lsat_s005.g0328.t1 | FAST LEU-RICH DOMAIN-CONTAINING |
| Lsat_s005.g0329.t1 | CELL CYCLE CONTROL PROTEIN 50 |
| Lsat_s005.g0330.t1 | |
| Lsat_s005.g0331.t1 | TRANSCRIPTION ACTIVATOR MSS11 |
| Lsat_s005.g0332.t1 | HEAT SHOCK PROTEIN HSP-12.2-RELATED |
| Lsat_s005.g0333.t1 | |
| Lsat_s005.g0334.t1 | |
| Lsat_s005.g0335.t1 | |
| Lsat_s005.g0336.t1 | IGGFC_BINDING DOMAIN-CONTAINING PROTEIN |
| Lsat_s005.g0337.t1 | |
| Lsat_s005.g0338.t1 | |
| Lsat_s005.g0339.t1 | |
| Lsat_s005.g0340.t1 | - |
| Lsat_s005.g0341.t1 | |
| Lsat_s005.g0342.t1 | DOUBLECORTIN DOMAIN-CONTAINING PROTEIN 1 |
| Lsat_s005.g0343.t1 | GOLGI SNARE BET1-RELATED |
| Lsat_s005.g0344.t1 | SERINE PROTEASE INHIBITOR, SERPIN |
| Lsat_s005.g0345.t1 | SERINE PROTEASE INHIBITOR, SERPIN |
| Lsat_s005.g0346.t1 | ECTOPIC P GRANULES PROTEIN 5 HOMOLOG |
| Lsat_s005.g0347.t1 | LOW MOLECULAR WEIGHT PROTEIN TYROSINE PHOSPHATASE |
| Lsat_s005.g0348.t1 | WD REPEAT CONTAINING PROTEIN |
| Lsat_s005.g0349.t1 | PAX TRANSCRIPTION ACTIVATION DOMAIN INTERACTING PROTEIN |
| Lsat_s005.g0350.t1 | UBX DOMAIN CONTAINING PROTEIN |
| Lsat_s005.g0351.t1 | |
| Lsat_s005.g0352.t1 | CAMP-DEPENDENT PROTEIN KINASE REGULATORY CHAIN |
| Lsat_s005.g0353.t1 | UBIQUITIN-LIKE DOMAIN-CONTAINING PROTEIN |
| Lsat_s005.g0354.t1 | UBIQUITIN-LIKE DOMAIN-CONTAINING PROTEIN |
| Lsat_s005.g0355.t1 | |
| Lsat_s005.g0356.t1 | UNCHARACTERIZED |
| Lsat_s005.g0357.t1 | DBX |
| Lsat_s005.g0358.t1 | |
| Lsat_s005.g0359.t1 | ZGC:172139 |
| Lsat_s005.g0360.t1 | STIMULATED BY RETINOIC ACID GENE 8 PROTEIN HOMOLOG |
| Lsat_s005.g0361.t1 | |
| Lsat_s005.g0362.t1 | |
| Lsat_s005.g0363.t1 | AMILORIDE-SENSITIVE SODIUM CHANNEL-RELATED |
| Lsat_s005.g0364.t1 | AMILORIDE-SENSITIVE SODIUM CHANNEL-RELATED |
| Lsat_s005.g0365.t1 | - |
| Lsat_s005.g0366.t1 | TUBULIN POLYGLUTAMYLASE COMPLEX SUBUNIT 1 |
| Lsat_s005.g0367.t1 | NUCLEOPORIN-LIKE PROTEIN 2 |
| Lsat_s005.g0368.t1 | TETRASPANIN |
| Lsat_s005.g0369.t1 | |
| Lsat_s005.g0370.t1 | AGAP011099-PA |
| Lsat_s005.g0371.t1 | |
| Lsat_s005.g0372.t1 |
