About Lamellibrachia satsuma

Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia satsumaAnnelidatube wormsCold seep110Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE)104711

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM3323900v1736MbScaffold2023BSQZ01Atmosphere and Ocean Research Institute, The University of TokyoPRJDB1419995.50%27,979

References
TitleJournalPubmed ID
Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsumaDNA Research37358253

Gene Information

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Gene IDDescription
Lsat_s005.g0023.t1UNCHARACTERIZED
Lsat_s005.g0024.t1
Lsat_s005.g0025.t1COLLAGEN ALPHA
Lsat_s005.g0026.t1
Lsat_s005.g0027.t1
Lsat_s005.g0028.t1DED DOMAIN-CONTAINING PROTEIN
Lsat_s005.g0029.t1NADH-UBIQUINONE OXIDOREDUCTASE B12 SUBUNIT
Lsat_s005.g0030.t1ORGANIC ANION TRANSPORTER
Lsat_s005.g0031.t1DNAJ HOMOLOG SUBFAMILY C MEMBER 13
Lsat_s005.g0032.t1ZINC FINGER-CONTAINING PROTEIN P48ZNF
Lsat_s005.g0033.t1EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEIN
Lsat_s005.g0034.t1EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEIN
Lsat_s005.g0035.t1
Lsat_s005.g0036.t1
Lsat_s005.g0037.t1
Lsat_s005.g0038.t1
Lsat_s005.g0039.t1
Lsat_s005.g0040.t1F20B24.22
Lsat_s005.g0041.t1
Lsat_s005.g0042.t1F20B24.22
Lsat_s005.g0043.t1BARDET-BIEDL SYNDROME 2 PROTEIN
Lsat_s005.g0044.t1ALPHA-CATULIN
Lsat_s005.g0045.t1GENERAL RECEPTOR FOR PHOSPHOINOSITIDES 1-ASSOCIATED SCAFFOLD PROTEIN-RELATED
Lsat_s005.g0046.t1N-ACETYLGLUTAMATE SYNTHASE
Lsat_s005.g0047.t1
Lsat_s005.g0048.t1PROTEIN CASC3
Lsat_s005.g0049.t1N-ACETYLGLUTAMATE SYNTHASE
Lsat_s005.g0050.t1
Lsat_s005.g0051.t1CILIA- AND FLAGELLA-ASSOCIATED PROTEIN 65
Lsat_s005.g0052.t1COMM DOMAIN-CONTAINING PROTEIN 9
Lsat_s005.g0053.t1
Lsat_s005.g0054.t1NUCLEOBINDIN
Lsat_s005.g0055.t1ALPHA-(1,3)-FUCOSYLTRANSFERASE C-RELATED
Lsat_s005.g0056.t1
Lsat_s005.g0057.t1ALPHA-(1,3)-FUCOSYLTRANSFERASE C-RELATED
Lsat_s005.g0058.t1ALPHA-(1,3)-FUCOSYLTRANSFERASE C-RELATED
Lsat_s005.g0059.t1PROTEIN-COUPLED RECEPTOR GPR1, PUTATIVE-RELATED
Lsat_s005.g0060.t1
Lsat_s005.g0061.t1
Lsat_s005.g0062.t1FAM187
Lsat_s005.g0063.t1RAN BINDING PROTEIN
Lsat_s005.g0064.t1PHD FINGER PROTEIN
Lsat_s005.g0065.t1SUGAR TRANSPORTER
Lsat_s005.g0066.t1GAMMA-SECRETASE SUBUNIT APH-1
Lsat_s005.g0067.t1
Lsat_s005.g0068.t1SUGAR TRANSPORTER
Lsat_s005.g0069.t1GTP-BINDING PROTEIN HFLX
Lsat_s005.g0070.t1MAJOR VAULT PROTEIN
Lsat_s005.g0071.t1DI-N-ACETYLCHITOBIASE
Lsat_s005.g0072.t1DI-N-ACETYLCHITOBIASE
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