About Lamellibrachia satsuma

Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia satsumaAnnelidatube wormsCold seep110Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE)104711

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM3323900v1736MbScaffold2023BSQZ01Atmosphere and Ocean Research Institute, The University of TokyoPRJDB1419995.50%27,979

References
TitleJournalPubmed ID
Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsumaDNA Research37358253

Gene Information

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Gene IDDescription
Lsat_s004.g0536.t1EGF-LIKE DOMAIN-CONTAINING PROTEIN
Lsat_s004.g0537.t1
Lsat_s004.g0538.t1ADAMTS A DISINTEGRIN AND METALLOPROTEASE WITH THROMBOSPONDIN MOTIFS PROTEASE
Lsat_s004.g0539.t1MYOTROPHIN
Lsat_s004.g0540.t1
Lsat_s004.g0541.t1
Lsat_s004.g0542.t1
Lsat_s004.g0543.t1PHD FINGER PROTEINS
Lsat_s004.g0544.t1BCR-ASSOCIATED PROTEIN, BAP
Lsat_s004.g0545.t1UBIQUITIN CARBOXYL-TERMINAL HYDROLASE
Lsat_s004.g0546.t1UBIQUITIN CARBOXYL-TERMINAL HYDROLASE
Lsat_s004.g0547.t1UBIQUITIN CARBOXYL-TERMINAL HYDROLASE
Lsat_s004.g0548.t1
Lsat_s004.g0549.t1
Lsat_s004.g0550.t1
Lsat_s004.g0551.t1UBIQUITIN CARBOXYL-TERMINAL HYDROLASE
Lsat_s004.g0552.t1MITOCHONDRIAL BASIC AMINO ACIDS TRANSPORTER-RELATED
Lsat_s004.g0553.t1ARP2/3 COMPLEX 20 KD SUBUNIT
Lsat_s004.g0554.t1
Lsat_s004.g0555.t1
Lsat_s004.g0556.t1MEMBRANE-SPANNING 4-DOMAINS SUBFAMILY A MS4A -RELATED
Lsat_s004.g0557.t1MEMBRANE-SPANNING 4-DOMAINS SUBFAMILY A MS4A -RELATED
Lsat_s004.g0558.t1
Lsat_s004.g0559.t1RAN GTPASE-ACTIVATING PROTEIN 1
Lsat_s004.g0560.t1
Lsat_s004.g0561.t1
Lsat_s004.g0562.t1POLYGLUTAMINE BINDING PROTEIN 1/MARVEL MEMBRANE-ASSOCIATING DOMAIN CONTAINING 3
Lsat_s004.g0563.t1-
Lsat_s004.g0564.t1WNT RELATED
Lsat_s004.g0565.t1SUPPRESSION OF TUMORIGENICITY 7
Lsat_s004.g0566.t180 KDA MCM3-ASSOCIATED PROTEIN
Lsat_s004.g0567.t1
Lsat_s004.g0568.t1
Lsat_s004.g0569.t1
Lsat_s004.g0570.t1
Lsat_s004.g0571.t1UNCHARACTERIZED
Lsat_s004.g0572.t1
Lsat_s004.g0573.t1
Lsat_s004.g0574.t1
Lsat_s004.g0575.t1
Lsat_s004.g0576.t1RGD1565685 PROTEIN
Lsat_s004.g0577.t1
Lsat_s004.g0578.t1
Lsat_s004.g0579.t1GLYCERATE KINASE
Lsat_s004.g0580.t1
Lsat_s004.g0581.t1
Lsat_s004.g0582.t1
Lsat_s004.g0583.t1
Lsat_s004.g0584.t1EGF-LIKE DOMAIN-CONTAINING PROTEIN
Lsat_s004.g0585.t1
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