About Lamellibrachia satsuma

Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia satsumaAnnelidatube wormsCold seep110Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE)104711

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM3323900v1736MbScaffold2023BSQZ01Atmosphere and Ocean Research Institute, The University of TokyoPRJDB1419995.50%27,979

References
TitleJournalPubmed ID
Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsumaDNA Research37358253

Gene Information

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Gene IDDescription
Lsat_s004.g0386.t1PLEXIN
Lsat_s004.g0387.t1DNA REPLICATION LICENSING FACTOR MCM FAMILY MEMBER
Lsat_s004.g0388.t1TRANSIENT RECEPTOR POTENTIAL ION CHANNEL PROTEIN
Lsat_s004.g0389.t1LEUKOTRIENE A-4 HYDROLASE
Lsat_s004.g0390.t1
Lsat_s004.g0391.t1CDNA SEQUENCE BC048562
Lsat_s004.g0392.t1UNCHARACTERIZED PROTEIN C17ORF53 HOMOLOG
Lsat_s004.g0393.t1SORBITOL DEHYDROGENASE
Lsat_s004.g0394.t1PROTEIN EVA-1
Lsat_s004.g0395.t1
Lsat_s004.g0396.t1
Lsat_s004.g0397.t1
Lsat_s004.g0398.t1
Lsat_s004.g0399.t1CXC DOMAIN-CONTAINING PROTEIN-RELATED
Lsat_s004.g0400.t1CENTROSOMAL PROTEIN OF 41 KDA
Lsat_s004.g0401.t1
Lsat_s004.g0402.t1PROTEIN-COUPLED RECEPTOR GPR1, PUTATIVE-RELATED
Lsat_s004.g0403.t1UNCHARACTERIZED
Lsat_s004.g0404.t1CXC DOMAIN-CONTAINING PROTEIN-RELATED
Lsat_s004.g0405.t1
Lsat_s004.g0406.t1
Lsat_s004.g0407.t1
Lsat_s004.g0408.t1AMINOACYLASE-1
Lsat_s004.g0409.t1
Lsat_s004.g0410.t1STABILIN
Lsat_s004.g0411.t1CYSTEINE-RICH PDF MOTIF DOMAIN-CONTAINING PROTEIN 1
Lsat_s004.g0412.t1
Lsat_s004.g0413.t1ADP-RIBOSYLGLYCOHYDROLASE
Lsat_s004.g0414.t1PHEROMONE SHUTDOWN PROTEIN
Lsat_s004.g0415.t1PROTEIN CBG13728
Lsat_s004.g0416.t1MITOCHONDRIAL RNA PSEUDOURIDINE SYNTHASE
Lsat_s004.g0417.t1PROTEIN LLP HOMOLOG
Lsat_s004.g0418.t1ACTIN
Lsat_s004.g0419.t1LEUCYL-TRNA SYNTHETASE
Lsat_s004.g0420.t1TRANSLOCON-ASSOCIATED PROTEIN, DELTA SUBUNIT
Lsat_s004.g0421.t1
Lsat_s004.g0422.t1JANUS-A/JANUS-B
Lsat_s004.g0423.t1SOLUTE CARRIER FAMILY 35
Lsat_s004.g0424.t1
Lsat_s004.g0425.t126S PROTESOME SUBUNIT 6
Lsat_s004.g0426.t1ADAPTOR PROTEIN, PHOSPHOTYROSINE INTERACTION, PH DOMAIN AND LEUCINE ZIPPER-CONTAINING 2
Lsat_s004.g0427.t1CABRIOLET.-RELATED
Lsat_s004.g0428.t1
Lsat_s004.g0429.t1ADAPTOR PROTEIN, PHOSPHOTYROSINE INTERACTION, PH DOMAIN AND LEUCINE ZIPPER-CONTAINING 2
Lsat_s004.g0430.t1CABRIOLET.-RELATED
Lsat_s004.g0431.t1REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Lsat_s004.g0432.t1
Lsat_s004.g0433.t1SERINE PEPTIDASE S9 FAMILY MEMBER
Lsat_s004.g0434.t1MITOCHONDRIAL 39S RIBOSOMAL PROTEIN L42
Lsat_s004.g0435.t1RE45066P-RELATED
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