Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Lamellibrachia satsuma | Annelida | tube worms | Cold seep | 110 | Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE) | 104711 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| ASM3323900v1 | 736Mb | Scaffold | 2023 | BSQZ01 | Atmosphere and Ocean Research Institute, The University of Tokyo | PRJDB14199 | 95.50% | 27,979 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsuma | DNA Research | 37358253 |
| Gene ID | Description |
|---|---|
| Lsat_s004.g0286.t1 | TESTIS-EXPRESSED PROTEIN 15 |
| Lsat_s004.g0287.t1 | |
| Lsat_s004.g0288.t1 | |
| Lsat_s004.g0289.t1 | CLASS II AMINOTRANSFERASE/8-AMINO-7-OXONONANOATE SYNTHASE |
| Lsat_s004.g0290.t1 | UBIQUITIN-CONJUGATING ENZYME E2 |
| Lsat_s004.g0291.t1 | ANKYRIN REPEAT PROTEIN |
| Lsat_s004.g0292.t1 | |
| Lsat_s004.g0293.t1 | G-PROTEIN COUPLED RECEPTOR |
| Lsat_s004.g0294.t1 | |
| Lsat_s004.g0295.t1 | |
| Lsat_s004.g0296.t1 | GAMMA TUBULIN COMPLEX PROTEIN |
| Lsat_s004.g0297.t1 | |
| Lsat_s004.g0298.t1 | SOLUTE CARRIER FAMILY 35 |
| Lsat_s004.g0299.t1 | DOLICHOL-PHOSPHATE MANNOSYLTRANSFERASE SUBUNIT 3 |
| Lsat_s004.g0300.t1 | G-PROTEIN COUPLED RECEPTOR |
| Lsat_s004.g0301.t1 | |
| Lsat_s004.g0302.t1 | G-PROTEIN COUPLED RECEPTOR |
| Lsat_s004.g0303.t1 | UNCHARACTERIZED |
| Lsat_s004.g0304.t1 | HOMEOBOX PROTEIN ARISTALESS |
| Lsat_s004.g0305.t1 | ANKYRIN REPEAT FAMILY PROTEIN |
| Lsat_s004.g0306.t1 | DIVALENT CATION TRANSPORTER SOLUTE CARRIER FAMILY 41 |
| Lsat_s004.g0307.t1 | SIMILAR TO DNA SEGMENT, CHR 10, WAYNE STATE UNIVERSITY 102,-EXPRESSED |
| Lsat_s004.g0308.t1 | LD33804P |
| Lsat_s004.g0309.t1 | G PATCH AND KOW-CONTAINING |
| Lsat_s004.g0310.t1 | STABILIN |
| Lsat_s004.g0311.t1 | UNCHARACTERIZED |
| Lsat_s004.g0312.t1 | CCHC-TYPE DOMAIN-CONTAINING PROTEIN |
| Lsat_s004.g0313.t1 | |
| Lsat_s004.g0314.t1 | MEIOSIS-EXPRESSED GENE 1 PROTEIN |
| Lsat_s004.g0315.t1 | OS09G0542200 PROTEIN |
| Lsat_s004.g0316.t1 | GTP-BINDING PROTEIN ALPHA SUBUNIT |
| Lsat_s004.g0317.t1 | |
| Lsat_s004.g0318.t1 | |
| Lsat_s004.g0319.t1 | BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE |
| Lsat_s004.g0320.t1 | |
| Lsat_s004.g0321.t1 | PROTEIN SSUH2 HOMOLOG |
| Lsat_s004.g0322.t1 | |
| Lsat_s004.g0323.t1 | PERIPHILIN 1 |
| Lsat_s004.g0324.t1 | |
| Lsat_s004.g0325.t1 | N-ACETYLGALACTOSAMINYLTRANSFERASE |
| Lsat_s004.g0326.t1 | RUVB-RELATED REPTIN AND PONTIN |
| Lsat_s004.g0327.t1 | CILIA AND FLAGELLA-ASSOCIATED PROTEIN 58-RELATED |
| Lsat_s004.g0328.t1 | RIBOSOME BIOGENESIS PROTEIN |
| Lsat_s004.g0329.t1 | FMRFAMIDE RECEPTOR-RELATED |
| Lsat_s004.g0330.t1 | RIBOSOME BIOGENESIS PROTEIN |
| Lsat_s004.g0331.t1 | ORIGIN RECOGNITION COMPLEX SUBUNIT 5 |
| Lsat_s004.g0332.t1 | REELIN |
| Lsat_s004.g0333.t1 | |
| Lsat_s004.g0334.t1 | |
| Lsat_s004.g0335.t1 |
