About Lamellibrachia satsuma

Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia satsumaAnnelidatube wormsCold seep110Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE)104711

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM3323900v1736MbScaffold2023BSQZ01Atmosphere and Ocean Research Institute, The University of TokyoPRJDB1419995.50%27,979

References
TitleJournalPubmed ID
Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsumaDNA Research37358253

Gene Information

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Gene IDDescription
Lsat_s005.g0123.t1BCL-2 RELATED
Lsat_s005.g0124.t1FATTY ACID ACYL TRANSFERASE-RELATED
Lsat_s005.g0125.t1FATTY ACID ACYL TRANSFERASE-RELATED
Lsat_s005.g0126.t1FATTY ACID ACYL TRANSFERASE-RELATED
Lsat_s005.g0127.t1BETA TRANSDUCIN-RELATED PROTEIN
Lsat_s005.g0128.t1MEMBRANE-ASSOCIATED GUANYLATE KINASE MAGUK
Lsat_s005.g0129.t1
Lsat_s005.g0130.t1
Lsat_s005.g0131.t1
Lsat_s005.g0132.t1
Lsat_s005.g0133.t152 KDA REPRESSOR OF THE INHIBITOR OF THE PROTEIN KINASE-LIKE PROTEIN-RELATED
Lsat_s005.g0134.t1PCD6 INTERACTING PROTEIN-RELATED
Lsat_s005.g0135.t1PHENYLALANYL-TRNA SYNTHETASE
Lsat_s005.g0136.t1IMMUNOGLOBULIN
Lsat_s005.g0137.t1MICROFIBRIL-ASSOCIATED GLYCOPROTEIN 3
Lsat_s005.g0138.t1
Lsat_s005.g0139.t1LIPOXYGENASE
Lsat_s005.g0140.t1
Lsat_s005.g0141.t1
Lsat_s005.g0142.t1LUPUS LA PROTEIN-RELATED
Lsat_s005.g0143.t1IMPORTIN BETA
Lsat_s005.g0144.t1GLYCEROL-3-PHOSPHATE DEHYDROGENASE
Lsat_s005.g0145.t1CYSTEINYL-TRNA SYNTHETASE
Lsat_s005.g0146.t1DENDRITIC CELL-SPECIFIC TRANSMEMBRANE PROTEIN
Lsat_s005.g0147.t1COP9 SIGNALOSOME COMPLEX SUBUNIT 7/DENDRITIC CELL PROTEIN GA17
Lsat_s005.g0148.t1E3 UBIQUITIN-PROTEIN LIGASE TTC3
Lsat_s005.g0149.t1XLR/SCP3/FAM9
Lsat_s005.g0150.t1CHROMATIN COMPLEXES SUBUNIT BAP18-RELATED
Lsat_s005.g0151.t1SHORT-CHAIN DEHYDROGENASE/REDUCTASE FAMILY 9C
Lsat_s005.g0152.t1SHORT-CHAIN DEHYDROGENASE/REDUCTASE FAMILY 9C
Lsat_s005.g0153.t1HISTONE H2A
Lsat_s005.g0154.t1HISTONE H2B
Lsat_s005.g0155.t1
Lsat_s005.g0156.t1HISTONE H3
Lsat_s005.g0157.t1
Lsat_s005.g0158.t1
Lsat_s005.g0159.t1HISTONE H4
Lsat_s005.g0160.t1HISTONE H3
Lsat_s005.g0161.t1HISTONE H2A
Lsat_s005.g0162.t1HISTONE H2B
Lsat_s005.g0163.t1HISTONE H4
Lsat_s005.g0164.t1HISTONE H3
Lsat_s005.g0165.t126S PROTEASOME NON-ATPASE REGULATORY SUBUNIT
Lsat_s005.g0166.t1CHROMOSOME-ASSOCIATED KINESIN KIF4A-RELATED
Lsat_s005.g0167.t1POLY [ADP-RIBOSE] POLYMERASE
Lsat_s005.g0168.t1
Lsat_s005.g0169.t1POLY [ADP-RIBOSE] POLYMERASE
Lsat_s005.g0170.t1
Lsat_s005.g0171.t1CYTOKINE RECEPTOR
Lsat_s005.g0172.t1
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