Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Lamellibrachia satsuma | Annelida | tube worms | Cold seep | 110 | Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE) | 104711 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM3323900v1 | 736Mb | Scaffold | 2023 | BSQZ01 | Atmosphere and Ocean Research Institute, The University of Tokyo | PRJDB14199 | 95.50% | 27,979 |
Title | Journal | Pubmed ID |
---|---|---|
Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsuma | DNA Research | 37358253 |
Gene ID | Description |
---|---|
Lsat_s005.g0123.t1 | BCL-2 RELATED |
Lsat_s005.g0124.t1 | FATTY ACID ACYL TRANSFERASE-RELATED |
Lsat_s005.g0125.t1 | FATTY ACID ACYL TRANSFERASE-RELATED |
Lsat_s005.g0126.t1 | FATTY ACID ACYL TRANSFERASE-RELATED |
Lsat_s005.g0127.t1 | BETA TRANSDUCIN-RELATED PROTEIN |
Lsat_s005.g0128.t1 | MEMBRANE-ASSOCIATED GUANYLATE KINASE MAGUK |
Lsat_s005.g0129.t1 | |
Lsat_s005.g0130.t1 | |
Lsat_s005.g0131.t1 | |
Lsat_s005.g0132.t1 | |
Lsat_s005.g0133.t1 | 52 KDA REPRESSOR OF THE INHIBITOR OF THE PROTEIN KINASE-LIKE PROTEIN-RELATED |
Lsat_s005.g0134.t1 | PCD6 INTERACTING PROTEIN-RELATED |
Lsat_s005.g0135.t1 | PHENYLALANYL-TRNA SYNTHETASE |
Lsat_s005.g0136.t1 | IMMUNOGLOBULIN |
Lsat_s005.g0137.t1 | MICROFIBRIL-ASSOCIATED GLYCOPROTEIN 3 |
Lsat_s005.g0138.t1 | |
Lsat_s005.g0139.t1 | LIPOXYGENASE |
Lsat_s005.g0140.t1 | |
Lsat_s005.g0141.t1 | |
Lsat_s005.g0142.t1 | LUPUS LA PROTEIN-RELATED |
Lsat_s005.g0143.t1 | IMPORTIN BETA |
Lsat_s005.g0144.t1 | GLYCEROL-3-PHOSPHATE DEHYDROGENASE |
Lsat_s005.g0145.t1 | CYSTEINYL-TRNA SYNTHETASE |
Lsat_s005.g0146.t1 | DENDRITIC CELL-SPECIFIC TRANSMEMBRANE PROTEIN |
Lsat_s005.g0147.t1 | COP9 SIGNALOSOME COMPLEX SUBUNIT 7/DENDRITIC CELL PROTEIN GA17 |
Lsat_s005.g0148.t1 | E3 UBIQUITIN-PROTEIN LIGASE TTC3 |
Lsat_s005.g0149.t1 | XLR/SCP3/FAM9 |
Lsat_s005.g0150.t1 | CHROMATIN COMPLEXES SUBUNIT BAP18-RELATED |
Lsat_s005.g0151.t1 | SHORT-CHAIN DEHYDROGENASE/REDUCTASE FAMILY 9C |
Lsat_s005.g0152.t1 | SHORT-CHAIN DEHYDROGENASE/REDUCTASE FAMILY 9C |
Lsat_s005.g0153.t1 | HISTONE H2A |
Lsat_s005.g0154.t1 | HISTONE H2B |
Lsat_s005.g0155.t1 | |
Lsat_s005.g0156.t1 | HISTONE H3 |
Lsat_s005.g0157.t1 | |
Lsat_s005.g0158.t1 | |
Lsat_s005.g0159.t1 | HISTONE H4 |
Lsat_s005.g0160.t1 | HISTONE H3 |
Lsat_s005.g0161.t1 | HISTONE H2A |
Lsat_s005.g0162.t1 | HISTONE H2B |
Lsat_s005.g0163.t1 | HISTONE H4 |
Lsat_s005.g0164.t1 | HISTONE H3 |
Lsat_s005.g0165.t1 | 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT |
Lsat_s005.g0166.t1 | CHROMOSOME-ASSOCIATED KINESIN KIF4A-RELATED |
Lsat_s005.g0167.t1 | POLY [ADP-RIBOSE] POLYMERASE |
Lsat_s005.g0168.t1 | |
Lsat_s005.g0169.t1 | POLY [ADP-RIBOSE] POLYMERASE |
Lsat_s005.g0170.t1 | |
Lsat_s005.g0171.t1 | CYTOKINE RECEPTOR |
Lsat_s005.g0172.t1 |