About Lamellibrachia satsuma

Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia satsumaAnnelidatube wormsCold seep110Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE)104711

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM3323900v1736MbScaffold2023BSQZ01Atmosphere and Ocean Research Institute, The University of TokyoPRJDB1419995.50%27,979

References
TitleJournalPubmed ID
Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsumaDNA Research37358253

Gene Information

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Gene IDDescription
Lsat_s005.g0273.t1ZINC FINGER PROTEIN
Lsat_s005.g0274.t1
Lsat_s005.g0275.t1SIKE FAMILY MEMBER
Lsat_s005.g0276.t1TRANSMEMBRANE 7 SUPERFAMILY MEMBER 3
Lsat_s005.g0277.t1
Lsat_s005.g0278.t1PIKACHURIN-LIKE PROTEIN
Lsat_s005.g0279.t1
Lsat_s005.g0280.t1
Lsat_s005.g0281.t1
Lsat_s005.g0282.t1
Lsat_s005.g0283.t1
Lsat_s005.g0284.t1
Lsat_s005.g0285.t1PEPTIDASE
Lsat_s005.g0286.t1
Lsat_s005.g0287.t1
Lsat_s005.g0288.t1
Lsat_s005.g0289.t1
Lsat_s005.g0290.t1
Lsat_s005.g0291.t1EPM2A-INTERACTING PROTEIN 1
Lsat_s005.g0292.t1
Lsat_s005.g0293.t1
Lsat_s005.g0294.t1PLAT DOMAIN-CONTAINING PROTEIN
Lsat_s005.g0295.t1IOJAP SUPERFAMILY ORTHOLOG
Lsat_s005.g0296.t1-
Lsat_s005.g0297.t1ARGININE DEMETHYLASE AND LYSYL-HYDROXYLASE JMJD
Lsat_s005.g0298.t1FATTY ACID DESATURASE 2
Lsat_s005.g0299.t1
Lsat_s005.g0300.t1CYCLIN Y, ISOFORM A
Lsat_s005.g0301.t1UBIQUITIN CARBOXYL-TERMINAL HYDROLASE
Lsat_s005.g0302.t1
Lsat_s005.g0303.t1SOLUTE CARRIER FAMILY 35, MEMBER F5
Lsat_s005.g0304.t1CENTROMERE PROTEIN E
Lsat_s005.g0305.t1ARRESTIN DOMAIN CONTAINING PROTEIN
Lsat_s005.g0306.t1ALSIN HOMOLOG
Lsat_s005.g0307.t1PEPTIDYL-GLYCINE ALPHA-AMIDATING MONOOXYGENASE
Lsat_s005.g0308.t1ALSIN HOMOLOG
Lsat_s005.g0309.t1M-AAA PROTEASE-INTERACTING PROTEIN 1, MITOCHONDRIAL
Lsat_s005.g0310.t160 KDA RIBONUCLEOPROTEIN SSA/RO
Lsat_s005.g0311.t160 KDA RIBONUCLEOPROTEIN SSA/RO
Lsat_s005.g0312.t160 KDA RIBONUCLEOPROTEIN SSA/RO
Lsat_s005.g0313.t1MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 15A-RELATED
Lsat_s005.g0314.t1
Lsat_s005.g0315.t1LEUCOKININ RECEPTOR-RELATED
Lsat_s005.g0316.t1
Lsat_s005.g0317.t1
Lsat_s005.g0318.t1VACUOLAR PROTEIN SORTING VPS41
Lsat_s005.g0319.t1
Lsat_s005.g0320.t1VACUOLAR PROTEIN SORTING VPS41
Lsat_s005.g0321.t1NME/NM23 FAMILY MEMBER 8
Lsat_s005.g0322.t1METHYLTRANSFERASE, FKBM FAMILY PROTEIN
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