About Lamellibrachia satsuma

Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia satsumaAnnelidatube wormsCold seep110Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE)104711

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM3323900v1736MbScaffold2023BSQZ01Atmosphere and Ocean Research Institute, The University of TokyoPRJDB1419995.50%27,979

References
TitleJournalPubmed ID
Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsumaDNA Research37358253

Gene Information

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Gene IDDescription
Lsat_s006.g0401.t1SIMILAR TO PREFERENTIALLY EXPRESSED ANTIGEN IN MELANOMA-LIKE 3
Lsat_s006.g0402.t1SERINE/THREONINE-PROTEIN PHOSPHATASE 2B CATALYTIC SUBUNIT 1-RELATED
Lsat_s006.g0403.t1
Lsat_s006.g0404.t1POTASSIUM CHANNEL TETRAMERISATION DOMAIN CONTAINING PROTEIN
Lsat_s006.g0405.t1UBA-LIKE DOMAIN-CONTAINING PROTEIN 2
Lsat_s006.g0406.t1MAHOGUNIN
Lsat_s006.g0407.t1
Lsat_s006.g0408.t160S RIBOSOMAL PROTEIN L38
Lsat_s006.g0409.t1
Lsat_s006.g0410.t1ADENINE NUCLEOTIDE ALPHA HYDROLASES-LIKE SUPERFAMILY PROTEIN
Lsat_s006.g0411.t1
Lsat_s006.g0412.t1
Lsat_s006.g0413.t1STG PROTEIN
Lsat_s006.g0414.t1MANNOSE, PHOSPHOLIPASE, LECTIN RECEPTOR RELATED
Lsat_s006.g0415.t1MANNOSE, PHOSPHOLIPASE, LECTIN RECEPTOR RELATED
Lsat_s006.g0416.t1
Lsat_s006.g0417.t1KILLER CELL LECTIN-LIKE RECEPTOR SUBFAMILY F MEMBER 2
Lsat_s006.g0418.t1MANNOSE, PHOSPHOLIPASE, LECTIN RECEPTOR RELATED
Lsat_s006.g0419.t1
Lsat_s006.g0420.t1
Lsat_s006.g0421.t1
Lsat_s006.g0422.t1ETHANOLAMINE-PHOSPHATE CYTIDYLYLTRANSFERASE
Lsat_s006.g0423.t1ETHANOLAMINE-PHOSPHATE CYTIDYLYLTRANSFERASE
Lsat_s006.g0424.t1ETHANOLAMINE-PHOSPHATE CYTIDYLYLTRANSFERASE
Lsat_s006.g0425.t1ETHANOLAMINE-PHOSPHATE CYTIDYLYLTRANSFERASE
Lsat_s006.g0426.t1COENZYME Q10 BIOSYNTHESIS PROTEIN 7
Lsat_s006.g0427.t1
Lsat_s006.g0428.t1RHO FAMILY GTPASE
Lsat_s006.g0429.t1CARBOHYDRATE BINDING DOMAIN CONTAINING PROTEIN
Lsat_s006.g0430.t1
Lsat_s006.g0431.t1
Lsat_s006.g0432.t1
Lsat_s006.g0433.t1
Lsat_s006.g0434.t1
Lsat_s006.g0435.t1
Lsat_s006.g0436.t1PROTEIN-COUPLED RECEPTOR GPR1, PUTATIVE-RELATED
Lsat_s006.g0437.t1TRANSDUCER OF ERBB2 TOB
Lsat_s006.g0438.t1
Lsat_s006.g0439.t1
Lsat_s006.g0440.t1DNA LIGASE 1/3 FAMILY MEMBER
Lsat_s006.g0441.t1EMILIN ELASTIN MICROFIBRIL INTERFACE-LOCATED PROTEIN ELASTIN MICROFIBRIL INTERFACER
Lsat_s006.g0442.t1
Lsat_s006.g0443.t1RIBONUCLEIC ACID BINDING PROTEIN S1
Lsat_s006.g0444.t1
Lsat_s006.g0445.t1NETRIN/LAMININ-RELATED
Lsat_s006.g0446.t1NETRIN/LAMININ-RELATED
Lsat_s006.g0447.t1
Lsat_s006.g0448.t1
Lsat_s006.g0449.t1
Lsat_s006.g0450.t1SYNTAXIN
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