Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Lamellibrachia satsuma | Annelida | tube worms | Cold seep | 110 | Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE) | 104711 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM3323900v1 | 736Mb | Scaffold | 2023 | BSQZ01 | Atmosphere and Ocean Research Institute, The University of Tokyo | PRJDB14199 | 95.50% | 27,979 |
Title | Journal | Pubmed ID |
---|---|---|
Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsuma | DNA Research | 37358253 |
Gene ID | Description |
---|---|
Lsat_s006.g0401.t1 | SIMILAR TO PREFERENTIALLY EXPRESSED ANTIGEN IN MELANOMA-LIKE 3 |
Lsat_s006.g0402.t1 | SERINE/THREONINE-PROTEIN PHOSPHATASE 2B CATALYTIC SUBUNIT 1-RELATED |
Lsat_s006.g0403.t1 | |
Lsat_s006.g0404.t1 | POTASSIUM CHANNEL TETRAMERISATION DOMAIN CONTAINING PROTEIN |
Lsat_s006.g0405.t1 | UBA-LIKE DOMAIN-CONTAINING PROTEIN 2 |
Lsat_s006.g0406.t1 | MAHOGUNIN |
Lsat_s006.g0407.t1 | |
Lsat_s006.g0408.t1 | 60S RIBOSOMAL PROTEIN L38 |
Lsat_s006.g0409.t1 | |
Lsat_s006.g0410.t1 | ADENINE NUCLEOTIDE ALPHA HYDROLASES-LIKE SUPERFAMILY PROTEIN |
Lsat_s006.g0411.t1 | |
Lsat_s006.g0412.t1 | |
Lsat_s006.g0413.t1 | STG PROTEIN |
Lsat_s006.g0414.t1 | MANNOSE, PHOSPHOLIPASE, LECTIN RECEPTOR RELATED |
Lsat_s006.g0415.t1 | MANNOSE, PHOSPHOLIPASE, LECTIN RECEPTOR RELATED |
Lsat_s006.g0416.t1 | |
Lsat_s006.g0417.t1 | KILLER CELL LECTIN-LIKE RECEPTOR SUBFAMILY F MEMBER 2 |
Lsat_s006.g0418.t1 | MANNOSE, PHOSPHOLIPASE, LECTIN RECEPTOR RELATED |
Lsat_s006.g0419.t1 | |
Lsat_s006.g0420.t1 | |
Lsat_s006.g0421.t1 | |
Lsat_s006.g0422.t1 | ETHANOLAMINE-PHOSPHATE CYTIDYLYLTRANSFERASE |
Lsat_s006.g0423.t1 | ETHANOLAMINE-PHOSPHATE CYTIDYLYLTRANSFERASE |
Lsat_s006.g0424.t1 | ETHANOLAMINE-PHOSPHATE CYTIDYLYLTRANSFERASE |
Lsat_s006.g0425.t1 | ETHANOLAMINE-PHOSPHATE CYTIDYLYLTRANSFERASE |
Lsat_s006.g0426.t1 | COENZYME Q10 BIOSYNTHESIS PROTEIN 7 |
Lsat_s006.g0427.t1 | |
Lsat_s006.g0428.t1 | RHO FAMILY GTPASE |
Lsat_s006.g0429.t1 | CARBOHYDRATE BINDING DOMAIN CONTAINING PROTEIN |
Lsat_s006.g0430.t1 | |
Lsat_s006.g0431.t1 | |
Lsat_s006.g0432.t1 | |
Lsat_s006.g0433.t1 | |
Lsat_s006.g0434.t1 | |
Lsat_s006.g0435.t1 | |
Lsat_s006.g0436.t1 | PROTEIN-COUPLED RECEPTOR GPR1, PUTATIVE-RELATED |
Lsat_s006.g0437.t1 | TRANSDUCER OF ERBB2 TOB |
Lsat_s006.g0438.t1 | |
Lsat_s006.g0439.t1 | |
Lsat_s006.g0440.t1 | DNA LIGASE 1/3 FAMILY MEMBER |
Lsat_s006.g0441.t1 | EMILIN ELASTIN MICROFIBRIL INTERFACE-LOCATED PROTEIN ELASTIN MICROFIBRIL INTERFACER |
Lsat_s006.g0442.t1 | |
Lsat_s006.g0443.t1 | RIBONUCLEIC ACID BINDING PROTEIN S1 |
Lsat_s006.g0444.t1 | |
Lsat_s006.g0445.t1 | NETRIN/LAMININ-RELATED |
Lsat_s006.g0446.t1 | NETRIN/LAMININ-RELATED |
Lsat_s006.g0447.t1 | |
Lsat_s006.g0448.t1 | |
Lsat_s006.g0449.t1 | |
Lsat_s006.g0450.t1 | SYNTAXIN |