About Lamellibrachia satsuma

Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia satsumaAnnelidatube wormsCold seep110Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE)104711

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM3323900v1736MbScaffold2023BSQZ01Atmosphere and Ocean Research Institute, The University of TokyoPRJDB1419995.50%27,979

References
TitleJournalPubmed ID
Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsumaDNA Research37358253

Gene Information

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Gene IDDescription
Lsat_s006.g0551.t1CHITINASE
Lsat_s006.g0552.t1CHITINASE
Lsat_s006.g0553.t1CHITINASE
Lsat_s006.g0554.t1-
Lsat_s006.g0555.t1PDZ AND LIM DOMAIN PROTEIN ZASP
Lsat_s006.g0556.t1PDZ AND LIM DOMAIN PROTEIN ZASP
Lsat_s006.g0557.t1DUAL SPECIFICITY PROTEIN PHOSPHATASE
Lsat_s006.g0558.t1ACYL-COA DEHYDROGENASE
Lsat_s006.g0559.t1GLUTATHIONE PEROXIDASE
Lsat_s006.g0560.t1
Lsat_s006.g0561.t1-
Lsat_s006.g0562.t1
Lsat_s006.g0563.t1
Lsat_s006.g0564.t1
Lsat_s006.g0565.t1
Lsat_s006.g0566.t1HIGH-AFFINITY CHOLINE TRANSPORTER 1
Lsat_s006.g0567.t1
Lsat_s006.g0568.t1
Lsat_s006.g0569.t1PDZ AND LIM DOMAIN PROTEIN ZASP
Lsat_s006.g0570.t1
Lsat_s006.g0571.t1PDZ AND LIM DOMAIN PROTEIN ZASP
Lsat_s006.g0572.t1PDZ AND LIM DOMAIN PROTEIN ZASP
Lsat_s006.g0573.t1PAIRED IMMUNOGLOBULIN-LIKE TYPE 2 RECEPTOR
Lsat_s006.g0574.t1
Lsat_s006.g0575.t1
Lsat_s006.g0576.t1PDZ AND LIM DOMAIN PROTEIN ZASP
Lsat_s006.g0577.t1
Lsat_s006.g0578.t1THYMUS, BRAIN AND TESTES-ASSOCIATED
Lsat_s006.g0579.t1TRNA (GUANINE-9-) METHYLTRANSFERASE
Lsat_s006.g0580.t1MICROSOMAL TRIGLYCERIDE TRANSFER PROTEIN, LARGE SUBUNIT
Lsat_s006.g0581.t1POLY ADP-RIBOSE GLYCOHYDROLASE
Lsat_s006.g0582.t1
Lsat_s006.g0583.t1E3 UBIQUITIN-PROTEIN LIGASE TRIM
Lsat_s006.g0584.t1MYOSIN HEAVY CHAIN, NON-MUSCLE
Lsat_s006.g0585.t1POLY ADP-RIBOSE GLYCOHYDROLASE
Lsat_s006.g0586.t1RAS-ASSOCIATING DOMAIN-CONTAINING PROTEIN
Lsat_s006.g0587.t1
Lsat_s006.g0588.t1SIGNAL PEPTIDE, CUB AND EGF-LIKE DOMAIN-CONTAINING
Lsat_s006.g0589.t1NUCLEAR FACTOR NF-KAPPA-B PROTEIN
Lsat_s006.g0590.t1
Lsat_s006.g0591.t1
Lsat_s006.g0592.t1
Lsat_s006.g0593.t1PROTEIN-COUPLED RECEPTOR GPR1, PUTATIVE-RELATED
Lsat_s006.g0594.t1
Lsat_s006.g0595.t1
Lsat_s006.g0596.t1
Lsat_s006.g0597.t1
Lsat_s006.g0598.t1MYOCARDIN-RELATED TRANSCRIPTION FACTOR-RELATED
Lsat_s006.g0599.t1LORICRIN
Lsat_s006.g0600.t1
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