About Lamellibrachia satsuma

Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia satsumaAnnelidatube wormsCold seep110Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE)104711

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM3323900v1736MbScaffold2023BSQZ01Atmosphere and Ocean Research Institute, The University of TokyoPRJDB1419995.50%27,979

References
TitleJournalPubmed ID
Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsumaDNA Research37358253

Gene Information

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Gene IDDescription
Lsat_s006.g0601.t1
Lsat_s006.g0602.t1SERINE/THREONINE-PROTEIN KINASE
Lsat_s006.g0603.t1FORKHEAD BOX PROTEIN J1
Lsat_s006.g0604.t1
Lsat_s006.g0605.t1WW DOMAIN-BINDING PROTEIN 11
Lsat_s006.g0606.t1EXOCYST COMPLEX PROTEIN EXO70
Lsat_s006.g0607.t1
Lsat_s006.g0608.t1POLYCOMB GROUP PROTEIN PC
Lsat_s006.g0609.t1
Lsat_s006.g0610.t1
Lsat_s006.g0611.t1LD44762P
Lsat_s006.g0612.t1EIF4G DOMAIN PROTEIN
Lsat_s006.g0613.t1UNCHARACTERIZED
Lsat_s007.g0001.t1
Lsat_s007.g0002.t1
Lsat_s007.g0003.t1TYROSINE PHOSPHATSE N18, PUTATIVE-RELATED
Lsat_s007.g0004.t1
Lsat_s007.g0005.t1WD REPEAT-CONTAINING PROTEIN 36
Lsat_s007.g0006.t1
Lsat_s007.g0007.t1TGF-BETA FAMILY
Lsat_s007.g0008.t1
Lsat_s007.g0009.t1
Lsat_s007.g0010.t1OXIDOREDUCTASE-RELATED
Lsat_s007.g0011.t1LD33804P
Lsat_s007.g0012.t1OXIDOREDUCTASE-RELATED
Lsat_s007.g0013.t1RNA POLYMERASE III TRANSCRIPTION INITIATION FACTOR B
Lsat_s007.g0014.t1PROTEIN ZWILCH HOMOLOG
Lsat_s007.g0015.t1SMAD
Lsat_s007.g0016.t1-
Lsat_s007.g0017.t1SMAD
Lsat_s007.g0018.t1
Lsat_s007.g0019.t1
Lsat_s007.g0020.t1
Lsat_s007.g0021.t1
Lsat_s007.g0022.t1
Lsat_s007.g0023.t1
Lsat_s007.g0024.t1
Lsat_s007.g0025.t1URINARY PROTEIN RUP /ACROSOMAL PROTEIN SP-10
Lsat_s007.g0026.t1AP COMPLEX SUBUNIT MU
Lsat_s007.g0027.t1COILED-COIL DOMAIN-CONTAINING PROTEIN 189
Lsat_s007.g0028.t1TRICHOHYALIN-RELATED
Lsat_s007.g0029.t1PROTEIN CBG12474
Lsat_s007.g0030.t1
Lsat_s007.g0031.t1UNCHARACTERIZED
Lsat_s007.g0032.t1
Lsat_s007.g0033.t1UNCHARACTERIZED
Lsat_s007.g0034.t1ATP-DEPENDENT RNA HELICASE DBP3
Lsat_s007.g0035.t1LYMPHOCYTE EXPANSION MOLECULE
Lsat_s007.g0036.t1CASPASE RECRUITMENT DOMAIN-CONTAINING PROTEIN 18
Lsat_s007.g0037.t1-
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