About Lamellibrachia satsuma

Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia satsumaAnnelidatube wormsCold seep110Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE)104711

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM3323900v1736MbScaffold2023BSQZ01Atmosphere and Ocean Research Institute, The University of TokyoPRJDB1419995.50%27,979

References
TitleJournalPubmed ID
Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsumaDNA Research37358253

Gene Information

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Gene IDDescription
Lsat_s007.g0288.t1
Lsat_s007.g0289.t1
Lsat_s007.g0290.t1
Lsat_s007.g0291.t1
Lsat_s007.g0292.t1
Lsat_s007.g0293.t1
Lsat_s007.g0294.t1
Lsat_s007.g0295.t1KRUEPPEL-LIKE TRANSCRIPTION FACTOR
Lsat_s007.g0296.t1
Lsat_s007.g0297.t1
Lsat_s007.g0298.t1MONOCARBOXYLATE TRANSPORTER
Lsat_s007.g0299.t1
Lsat_s007.g0300.t1FIBROIN HEAVY CHAIN FIB-H LIKE PROTEIN
Lsat_s007.g0301.t1SULFOTRANSFERASE DOMAIN-CONTAINING PROTEIN
Lsat_s007.g0302.t1
Lsat_s007.g0303.t1
Lsat_s007.g0304.t1TRANSIENT RECEPTOR POTENTIAL CATION CHANNEL PROTEIN PAINLESS
Lsat_s007.g0305.t1ADHESIN, PUTATIVE-RELATED
Lsat_s007.g0306.t1TRANSIENT RECEPTOR POTENTIAL CATION CHANNEL PROTEIN PAINLESS
Lsat_s007.g0307.t1
Lsat_s007.g0308.t1
Lsat_s007.g0309.t1NUCLEOSIDE DIPHOSPHATE KINASE 6
Lsat_s007.g0310.t1
Lsat_s007.g0311.t1
Lsat_s007.g0312.t1ANK_REP_REGION DOMAIN-CONTAINING PROTEIN-RELATED
Lsat_s007.g0313.t1SYNTENIN RELATED
Lsat_s007.g0314.t1PHOSPHATASE AND ACTIN REGULATOR PHACTR
Lsat_s007.g0315.t1
Lsat_s007.g0316.t1
Lsat_s007.g0317.t12-IMINOBUTANOATE/2-IMINOPROPANOATE DEAMINASE RIDA
Lsat_s007.g0318.t12-IMINOBUTANOATE/2-IMINOPROPANOATE DEAMINASE RIDA
Lsat_s007.g0319.t1RIBONUCLEASES P/MRP PROTEIN SUBUNIT POP1
Lsat_s007.g0320.t1LYSOPHOSPHOLIPASE-RELATED
Lsat_s007.g0321.t1
Lsat_s007.g0322.t1UNCHARACTERIZED
Lsat_s007.g0323.t1PROTEIN C20ORF43 HOMOLOG
Lsat_s007.g0324.t1UDP-GLUCOSE 4-EPIMERASE
Lsat_s007.g0325.t1
Lsat_s007.g0326.t1
Lsat_s007.g0327.t1CERAMIDE GLUCOSYLTRANSFERASE
Lsat_s007.g0328.t1DIOXYGENASE RV0097-RELATED
Lsat_s007.g0329.t1DIOXYGENASE RV0097-RELATED
Lsat_s007.g0330.t1DIOXYGENASE RV0097-RELATED
Lsat_s007.g0331.t1DIOXYGENASE RV0097-RELATED
Lsat_s007.g0332.t1FAS-ASSOCIATED PROTEIN
Lsat_s007.g0333.t1ANK_REP_REGION DOMAIN-CONTAINING PROTEIN
Lsat_s007.g0334.t1
Lsat_s007.g0335.t1DOUBLESEX AND MAB-3 RELATED TRANSCRIPTION FACTOR DMRT
Lsat_s007.g0336.t1
Lsat_s007.g0337.t1DOUBLESEX AND MAB-3 RELATED TRANSCRIPTION FACTOR DMRT
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